Protein

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Genbank accession
YP_009045053.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,85
TF
Evidence RBPdetect2
Probability 0,89
Protein sequence
MYKIKDIETRINNKTVDIGDIGCRFYTEDENTAYVRIGINDEKGRINFKESNLTPKLHLFTEDGSIFKNEPVLIDDNVKGFLTYKIPKNVIKHVGMVRCKLFLENDHERIHVANFHFYIIDSGIDNAVQKEVSITLVEDTVKRIIRTSASELLGDDFKETLNTTAKQYIADNADKFKGERGEKGEAGERGAQGVPGVSVDLTNAIGNFANLKDVVNLPLQPNFIEEINKLSTTKGDMTVSVVHAPSQTFHVVQPISSSRALRVWFNKNQKDDYIIFRESEIGDYTNENKSIGYQNLEMVDSSMFNSSYAPNYYATTVGATLKGTVIADKINFTSYCNNVGGVWEAILDEGTINEQKKTISTYSSTNKVDNEQLLFDNLDYKKHTLKLVYKGQDPSYPVSSPRGWLYFGGARPQDIKGTINVFKLVPVVTNVTQSLYSYSNKDVAMQIRDANNSTGEQFVPEHNGIATAFKNKEAKLLGDNKELPFITDRVYTDIKNVSLVQNVNGRVDNNDLINIITNHSIKNGAVSIYGNVKFLKNTYVKTAYAGMVPYFTKNVNKIKSSLNNTYKPDISGTYRIEKMPEKLQAKSYVLSNDTNDVVTAFEFENIIKTNRINDNAIKGDTWIEHRNADMGKIYNQQFKEETIEAGYEWQFKLNYRTTEIPYANTLI
Physico‐chemical
properties
protein length:667 AA
molecular weight: 75440,00240 Da
isoelectric point:6,32393
aromaticity:0,09895
hydropathy:-0,50330

Domains

Domains [InterPro]
DC_0885
STR
1–373
DC_0885 DC_1116
IPR018913
ATT
4–143
IPR018913 G3DSA:2.60.120.260
G3DSA:2.60.40.3350
ATT
6–125
G3DSA:2.60.40.3350
YP_009045053.1
1 667
Architecture
ATT
STR
RBD
ATT 1-143 | STR 144-399 | RBD 400-667
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009045053.1
1 667
Domain Start End Length (AA) Confidence
N-terminal 1 270 270 0,9924
Central domain 271 469 200 0,6273
C-terminal 470 667 197 0,5052
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-270
Central
271-469
C-terminal
470-667

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage DW2
[NCBI] 		1464127 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Staphylococcus aureus
[NCBI] 		1280 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009045053.1 [NCBI]
Genbank nucleotide accession
NC_024391.1 [NCBI]
CDS location
range 37086 -> 39089
strand +
CDS
ATGTACAAAATAAAAGACATTGAAACGCGAATAAATAACAAAACAGTTGATATTGGCGACATAGGTTGTCGCTTCTACACGGAAGACGAAAACACTGCTTATGTCAGAATCGGTATCAACGATGAAAAAGGTAGAATCAACTTCAAAGAAAGTAATTTGACACCTAAGTTACATCTGTTCACGGAAGATGGTTCTATATTCAAAAATGAGCCCGTTTTAATCGACGATAATGTAAAAGGGTTCCTTACCTACAAGATACCTAAAAACGTCATTAAACACGTTGGTATGGTGCGTTGTAAGTTGTTTCTAGAGAACGACCACGAAAGAATACACGTCGCAAACTTCCATTTCTACATTATCGATAGTGGTATAGATAACGCAGTGCAAAAAGAGGTGTCTATCACATTAGTTGAAGACACTGTAAAAAGAATTATCCGTACAAGTGCTAGCGAGTTACTAGGAGACGACTTCAAAGAAACGTTAAACACAACTGCTAAACAATACATCGCTGACAATGCAGACAAGTTTAAGGGCGAACGTGGCGAAAAAGGAGAAGCTGGCGAACGAGGTGCTCAAGGCGTTCCAGGAGTTAGCGTTGATTTAACTAATGCAATAGGTAACTTTGCTAATTTAAAAGATGTTGTCAATTTACCTTTACAACCGAATTTTATCGAGGAGATTAACAAGTTATCTACAACTAAAGGCGATATGACAGTAAGCGTTGTTCATGCGCCATCTCAAACATTCCATGTAGTACAACCAATAAGCAGTAGTCGGGCTTTAAGAGTTTGGTTCAATAAAAACCAAAAAGATGACTATATCATTTTCAGAGAGTCGGAAATAGGAGACTACACCAACGAAAACAAATCGATCGGGTACCAAAATTTAGAAATGGTTGATAGTAGTATGTTCAATTCTTCTTATGCACCCAACTATTATGCAACTACTGTAGGTGCAACACTCAAAGGAACAGTTATTGCGGATAAAATCAATTTCACATCGTATTGCAATAACGTTGGCGGTGTTTGGGAAGCGATACTTGATGAGGGAACAATTAACGAACAGAAAAAAACGATTTCTACGTATAGCAGTACCAATAAAGTTGATAACGAGCAACTACTTTTCGATAACTTAGATTATAAAAAACATACACTGAAATTAGTATACAAAGGTCAAGACCCTAGCTATCCAGTTTCATCTCCTAGAGGTTGGCTATATTTCGGTGGTGCGCGTCCACAAGATATTAAAGGTACAATCAACGTGTTTAAATTAGTTCCGGTTGTAACAAATGTCACTCAATCACTTTATAGCTACTCTAACAAAGACGTTGCAATGCAAATTAGAGACGCTAACAATTCAACTGGAGAGCAATTTGTGCCAGAACATAACGGAATAGCGACAGCTTTTAAAAACAAAGAGGCTAAGTTATTAGGAGACAATAAAGAATTACCATTTATCACTGATAGAGTTTATACAGATATCAAAAATGTTAGCTTAGTTCAAAACGTTAACGGTAGAGTGGACAACAACGATTTAATAAATATCATCACAAACCACTCAATTAAAAACGGCGCAGTTTCCATATATGGCAACGTTAAATTTTTAAAGAACACATATGTCAAAACAGCATATGCTGGCATGGTGCCATATTTCACTAAAAACGTTAACAAAATCAAATCGTCATTGAATAACACATATAAACCAGATATAAGCGGAACATACAGAATTGAGAAGATGCCCGAAAAACTGCAAGCTAAATCATATGTATTAAGTAATGATACTAATGATGTTGTTACGGCTTTTGAATTTGAAAATATTATCAAAACAAACAGAATTAACGACAATGCGATAAAAGGCGATACATGGATAGAGCACCGAAACGCAGACATGGGCAAGATTTATAACCAACAATTCAAAGAAGAAACGATTGAAGCAGGTTATGAATGGCAATTCAAACTGAATTACAGAACGACAGAAATACCATACGCAAACACATTAATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
2d9661db07acb85be6254260c17c4c5c4a0b23e684fd51cf9f8e8c82654a0a11
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7329
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50