Protein

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Genbank accession
QIG66678.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MPKLYYNVDPLLKFFIGFSWADPDPVMNPNADDDGVWVLPGYATFVSPPEEVEGNIRVFDFTLNKWGYVKPEDLGIVEPTPEPQGPSAFDVDTEMERRSQDLFVFAGIVFQCRVKDQKRIAGAAAAALAAMMAGAQAGDFRWADPDADFKWIDVNNNEHVMDAQTMFAFGRAAMKWESDHIFAARALKDTVPIPDDYREDEHWPAVPVAPVTEGEPDPGEDQPSE
Physico‐chemical
properties
protein length:225 AA
molecular weight: 25112,75780 Da
isoelectric point:4,25806
aromaticity:0,12000
hydropathy:-0,38311

Domains

Domains [InterPro]
DC_2197
STR
17–205
DC_2197
IPR025484
STR
104–193
IPR025484
QIG66678.1
1 225
Architecture
STR
STR 17-205 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RHph_TM16
[NCBI] 		2509755 No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIG66678.1 [NCBI]
Genbank nucleotide accession
MN988459.1 [NCBI]
CDS location
range 12137 -> 12814
strand +
CDS
ATGCCAAAGCTTTATTACAACGTCGATCCGCTCCTGAAATTCTTCATCGGCTTTTCTTGGGCCGACCCCGATCCGGTGATGAACCCGAATGCAGACGACGACGGTGTATGGGTCCTCCCCGGCTACGCCACCTTCGTCTCGCCCCCGGAAGAGGTCGAGGGCAACATCCGCGTCTTCGACTTCACCCTGAACAAGTGGGGCTACGTCAAGCCGGAAGACCTCGGCATCGTGGAGCCGACACCAGAACCACAGGGGCCATCGGCGTTCGACGTGGACACTGAAATGGAGCGCCGCTCGCAGGACCTCTTCGTCTTTGCCGGGATTGTCTTCCAGTGCCGCGTCAAGGACCAGAAGCGCATTGCCGGGGCCGCCGCCGCTGCCCTCGCGGCGATGATGGCCGGGGCGCAGGCCGGTGACTTCCGCTGGGCCGACCCAGACGCTGACTTCAAGTGGATCGACGTCAACAACAACGAACACGTGATGGACGCCCAGACGATGTTCGCTTTTGGACGGGCCGCCATGAAATGGGAAAGCGACCACATCTTCGCTGCCCGGGCGCTGAAGGACACGGTGCCGATCCCTGACGACTACCGCGAAGACGAGCACTGGCCTGCGGTTCCGGTCGCACCTGTCACGGAAGGCGAGCCGGACCCCGGTGAGGACCAGCCTAGCGAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f19d2057051bdd7979c702381045fcdda92762694a33cb221da873027de0d739
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8582
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Patterns of diversity and host range of bacteriophage communities associated with bean-nodulatin bacteria Vann Cauwenberghe,J., Santamaria,R.I., Bustos,P., Juarez,S. and Gonzalez,V. 1998-01 — GenBank