Protein

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Genbank accession
XPK42572.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,57
Protein sequence
MALISQSIKNLKGGISQQPDILRYPDQGSRQVNGWSSETEGLQKRPPMVFLKTLGGSGDLGQAPYIHLINRDENEQYYAVFTGTGIRVFDLAGNEKQVRYPTDGSSYINTANPRNDLRMVTVADYTFIVNRNVRVTRNTNAVNLAGFNPKKDALINVRGGQYGRTLQIQINGGTQASYQIPDGSQPAHVNNTDAQWLAEELARQLRVNTPGWTFNVGQGFIHIIADAAGEINSLVTKDGYADQLINPVTHYAQSFSKLPPNAPDGYMVKIVGDASKSADQYYVRYDATRKVWVETLGWNVNNQLLYETMPHALVRASDGNFEFRWIEWSPKTCGDDDTNPWPSFMDSTINDVFFFRNRLGFLSGENIILSRTAKYFNFYPASIANLSDDDPIDVAVSTNRIAILKYAVPFSEELLIWSDEAQFVLTASGTLTSKSVELNLTTQFDVQDRARPYGIGRNVYFASPRSSFTSIHRYYAVQDVSSVKNAEDITAHVPNYIPNGVFSICGSGTENFCSVLSQGDPSKIFIYKFLYLNEELRQQSWSHWDFGGNVQVLACQSINSDMYVILRNEFNTFLAKISFTKNAIDLRGEPYRAFMDMKIRYTIPSGTYNDDTFTTSIHIPTIYGANFGRDKITVLEPDGKITVCEQPTGGWNSDPWLRLNGNLEGREVFIGFNIHFVYEFSKFLIKQTADDGSTSTEDIGRLQLRRAWVNYEESGTFDIYVENQSSNWKYTMAGARLGSNGLRAGRLNLGTGQYRFPVVGNAKFNTVYIVSDATTPLNIIGCGWEGNYLRRSSGI
Physico‐chemical
properties
protein length:795 AA
molecular weight: 89169,68530 Da
isoelectric point:5,81977
aromaticity:0,11950
hydropathy:-0,36138

Domains

Domains [InterPro]
IPR058003
TTP
1–795
IPR058003
XPK42572.1
1 795
Architecture
TTP
TTP 1-795
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XPK42572.1
1 795
Domain Start End Length (AA) Confidence
N-terminal 1 140 140 0,9929
Central domain 141 349 210 0,1866
C-terminal 350 795 445 0,1881
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-140
Central
141-349
C-terminal
350-795

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage MeretOppenheim_Bas102
[NCBI] 		3398427 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XPK42572.1 [NCBI]
Genbank nucleotide accession
PQ850620 [NCBI]
CDS location
range 27907 -> 30294
strand +
CDS
ATGGCACTCATTAGCCAATCAATCAAGAACTTGAAGGGTGGTATCAGCCAACAGCCTGACATCCTTCGTTATCCCGACCAAGGGTCACGCCAAGTTAACGGTTGGTCTTCGGAGACCGAGGGCCTCCAAAAGCGTCCACCTATGGTTTTCCTTAAGACACTTGGAGGTAGTGGCGACTTAGGACAAGCACCTTACATTCACCTGATTAACCGTGATGAGAACGAGCAGTATTATGCTGTGTTCACTGGCACAGGAATCCGAGTGTTTGACCTTGCTGGTAACGAGAAACAGGTACGATACCCTACAGATGGTTCCTCATACATCAACACTGCAAACCCAAGGAATGACTTGAGGATGGTCACTGTGGCCGACTATACGTTCATCGTTAACAGAAACGTAAGGGTTACTCGTAACACCAATGCAGTAAACCTTGCAGGCTTTAACCCTAAGAAGGATGCGTTAATCAACGTTCGTGGTGGTCAGTATGGTAGGACACTACAGATTCAGATAAACGGTGGAACCCAAGCATCCTACCAGATTCCTGACGGCTCACAGCCAGCACATGTTAATAACACGGATGCTCAATGGCTCGCTGAGGAACTTGCGCGGCAACTTCGGGTAAATACTCCCGGATGGACATTTAACGTTGGACAGGGTTTCATCCACATTATTGCAGATGCTGCTGGTGAAATTAACTCACTAGTCACTAAGGACGGATACGCTGACCAGTTGATTAATCCTGTTACTCACTACGCTCAGTCATTCTCTAAGTTGCCACCTAACGCTCCTGATGGGTACATGGTGAAAATAGTAGGGGATGCGTCTAAGTCTGCTGACCAGTATTACGTTCGCTATGACGCTACACGTAAAGTCTGGGTTGAAACATTAGGCTGGAATGTTAACAATCAGCTTCTGTACGAAACAATGCCTCACGCGTTGGTACGCGCTTCTGACGGTAACTTTGAGTTCAGGTGGATTGAGTGGAGTCCTAAAACCTGTGGTGACGACGACACAAACCCGTGGCCTTCCTTCATGGACTCCACAATAAACGATGTGTTCTTCTTCCGTAACCGTTTGGGTTTCCTTAGTGGTGAAAATATCATCCTGAGTAGAACCGCTAAGTACTTCAACTTCTACCCAGCGTCAATCGCAAACTTGAGTGACGATGACCCTATCGACGTAGCTGTGAGTACCAACCGAATCGCAATCCTTAAGTACGCCGTTCCGTTCTCAGAGGAGTTACTCATCTGGTCCGACGAAGCACAGTTCGTTCTGACAGCTTCAGGAACCCTTACATCAAAGTCAGTTGAGTTGAACCTAACGACCCAGTTTGATGTACAGGACCGAGCGAGACCTTATGGTATTGGGCGTAATGTCTACTTTGCTAGTCCGAGGTCCAGCTTCACGTCCATCCACAGGTACTACGCTGTGCAGGATGTAAGTTCCGTTAAGAACGCTGAGGACATCACAGCGCACGTTCCTAACTACATCCCAAATGGTGTGTTTAGTATTTGTGGAAGTGGTACGGAAAACTTCTGTTCGGTACTATCTCAAGGGGACCCAAGTAAAATCTTCATATACAAATTCCTGTACCTGAACGAAGAGTTAAGACAACAGTCGTGGTCCCATTGGGACTTTGGGGGAAACGTACAGGTTCTAGCGTGTCAGAGTATAAACTCAGATATGTATGTGATTCTTCGCAATGAGTTCAATACGTTTCTAGCTAAAATCTCTTTCACTAAGAACGCCATTGACTTACGAGGTGAACCTTACCGTGCCTTTATGGACATGAAGATTCGCTACACGATTCCGAGTGGAACATACAACGATGACACGTTCACTACCTCTATCCATATTCCAACCATTTATGGTGCAAACTTCGGGAGGGACAAAATCACCGTATTGGAGCCTGATGGTAAGATAACCGTATGTGAGCAACCAACTGGTGGGTGGAATAGTGACCCTTGGCTGAGACTCAACGGTAACTTAGAGGGACGTGAAGTGTTCATTGGGTTCAACATACACTTCGTCTATGAGTTCTCTAAGTTCCTCATCAAGCAAACTGCCGACGATGGGTCTACCTCCACGGAAGACATCGGTCGCTTACAGTTACGCAGAGCGTGGGTTAACTACGAGGAATCTGGTACGTTCGACATTTATGTTGAGAACCAATCGTCCAACTGGAAGTACACAATGGCTGGTGCCCGCTTAGGCTCTAACGGTCTGAGGGCTGGGCGGTTGAACTTAGGGACCGGACAATACCGATTCCCTGTGGTGGGTAACGCTAAGTTCAATACCGTATACATCGTGTCAGATGCGACTACCCCTCTGAACATCATTGGGTGTGGCTGGGAAGGTAACTACTTACGGAGAAGTTCCGGTATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
abdbcab883b79ad45e59673895e642e920e132f9b27157465bb320d092dbf2ec
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3129
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequences of Escherichia coli phages Huey, Dewey, and Louie Maffei,E., Willi,L. and Harms,A. — — GenBank