Protein

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Genbank accession
QQO89487.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 0,98
Protein sequence
MPVVWHCGFNGIINNTMGIGQSNLFINTNDTSTVSHALSGDNLINNVFGRGNGTQNGGFLPLITYYGRKWTSNGAYGSSYVFGRVKPSFFDNSVPCLSSEMSQPANQSDWFGGWQFRVDLCWPSAERLTTSWRMGFRIGRATHPTYNIGYGVYICPAGINGAEGQNLYNIPITAGQDEKYMEVEWLADTKTLNIYLNDEIVSTRTNYTANDMSYGLILTCEHYVGSNTSSTPFFGFELRDMYVQKIVSDADQRLGSSTKVYAFNPVNDDVVQFSRPDAYSSNAAVAVTPISAGGITPTPSQSPAILGADVVGQQDLYNIDISKVSTRLASIEAVNVRTMARNPLLGNRQSAAIAKSGATQTQSENTSTLEQGGLWRFNTLQMVSDPADGARWNLTKLAGLKVGTKFVA
Physico‐chemical
properties
protein length:408 AA
molecular weight: 44456,15250 Da
isoelectric point:5,85046
aromaticity:0,10539
hydropathy:-0,24412

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QQO89487.1
1 408
Domain Start End Length (AA) Confidence
N-terminal 1 204 204 0,0011
Central domain 205 397 194 0,1097
C-terminal 398 408 10 0,9977
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-204
Central
205-397
C-terminal
398-408

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage ER24
[NCBI] 		2801569 Uroviricota > Caudoviricetes > Casjensviridae > Chivirus ER24 >
Host Salmonella typhimurium
[NCBI] 		90371 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QQO89487.1 [NCBI]
Genbank nucleotide accession
MW355479 [NCBI]
CDS location
range 59113 -> 60339
strand +
CDS
ATGCCTGTAGTTTGGCACTGCGGTTTTAATGGGATCATCAATAACACGATGGGTATCGGTCAGTCGAACCTGTTTATCAACACAAACGATACCTCGACGGTAAGCCATGCCCTCTCCGGCGACAATTTAATCAACAACGTCTTCGGGCGCGGCAACGGCACCCAAAACGGCGGCTTTCTCCCTTTGATCACTTACTACGGACGTAAATGGACATCAAATGGTGCGTATGGGTCTTCGTACGTCTTCGGCCGCGTTAAGCCGTCGTTTTTTGACAATTCCGTACCGTGCCTTAGCTCTGAAATGTCGCAGCCCGCAAACCAATCCGACTGGTTCGGCGGTTGGCAGTTCCGCGTTGATCTGTGCTGGCCGTCGGCGGAACGCCTGACAACGTCGTGGCGCATGGGCTTCCGTATTGGCCGCGCAACACACCCTACATACAATATTGGTTATGGTGTCTATATCTGCCCGGCAGGTATTAACGGAGCAGAAGGCCAAAACTTGTATAACATCCCGATTACTGCGGGTCAGGACGAGAAGTATATGGAGGTGGAATGGTTGGCGGACACCAAGACCCTTAACATCTATCTGAACGACGAAATTGTCTCGACCCGCACCAACTATACTGCCAACGATATGTCGTACGGCCTTATTTTGACGTGCGAACATTACGTTGGCTCTAACACTAGCTCCACACCGTTCTTCGGTTTTGAACTGCGGGACATGTATGTCCAGAAAATCGTTTCAGATGCAGATCAACGCCTCGGGTCTTCGACGAAAGTATATGCGTTCAATCCCGTTAATGACGATGTTGTACAGTTCTCTCGGCCAGACGCATATTCGTCAAACGCCGCCGTCGCGGTAACGCCGATCTCTGCCGGGGGTATCACCCCGACGCCGTCGCAATCTCCTGCAATTCTCGGGGCGGACGTGGTCGGACAGCAAGACCTGTATAACATTGACATTTCCAAAGTCAGCACACGTCTGGCGTCGATTGAAGCAGTTAACGTCCGGACGATGGCCCGAAATCCGTTGCTTGGAAATAGACAATCTGCCGCGATCGCCAAGTCCGGGGCCACTCAAACCCAAAGCGAGAACACATCGACGCTCGAACAAGGCGGCCTGTGGCGTTTCAACACGTTGCAGATGGTGTCTGACCCGGCGGACGGCGCACGTTGGAACCTTACAAAACTGGCCGGGCTTAAAGTCGGTACCAAATTCGTCGCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9e31cff131ca4edf25394104aee353017b7aaf175a47a01e5f8459b3d70adb60
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6486
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterisation of bacteriophages with activity against invasive non-typhoidal Salmonella causing bloodstream infection in Malawi Rodwell,E.V., Wenner,N., Pulford,C.V., Cai,Y., Bowers-Barnard,A., Beckett,A., Rigby,J., Picton,D., Blower,T.R., Feasey,N.A., Hinton,J.C.D. and Perez-Sepulveda,B. — — GenBank