Protein

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Genbank accession
UMO77177.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MTIMKSEWTTPIQIGDDLATHKDWWASFHDALINKSVWTWERVTGDFADFNSVTDVSNNLPINAGFRIYKFGDAMTLSGRSPIYLRVEYWSNWDGTMSAVSGQSTRSMVKYPHVVVYFGGSVTAAGVVSGGTMWQSSPAYPNTAYGRGSASGFTQIPACQNYIYTDTVKGHFAIVFGASSKSGALPNPSGNFQKFDAVRFAFEREYNIATGETMPNFTTFMITSDQAWSLTAASSAYTGRWVNFDHIQNVWITPYDRTMCRYLGQFQDGGVSAYTMYQPFMLFSSTQGLVPSRFMYLYRAGSKTPYTVSTVSVNGVPVDMMHLPYLRCGVMGSLTSDMNSSTSIDDSSNWLRNTAVCYAMSQ
Physico‐chemical
properties
protein length:362 AA
molecular weight: 40207,71790 Da
isoelectric point:6,58130
aromaticity:0,14365
hydropathy:-0,17376

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UMO77177.1
1 362
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0012
Central domain 11 209 200 0,0023
C-terminal 210 362 152 0,9993
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-209
C-terminal
210-362

Taxonomy

  Name Taxonomy ID Lineage
Phage Stenotrophomonas maltophilia phage vB_SmaM_Ps15
[NCBI] 		3071007 Uroviricota > Caudoviricetes > Menderavirus >
Host Stenotrophomonas maltophilia
[NCBI] 		40324 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Lysobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UMO77177.1 [NCBI]
Genbank nucleotide accession
OL702939 [NCBI]
CDS location
range 15472 -> 16560
strand +
CDS
ATGACAATCATGAAGTCCGAGTGGACAACGCCTATCCAGATCGGCGATGATCTCGCCACACACAAAGACTGGTGGGCGTCGTTCCATGACGCGCTGATCAACAAATCGGTATGGACTTGGGAGCGAGTCACTGGCGACTTCGCCGACTTCAACTCCGTGACTGACGTATCAAACAACTTGCCAATCAACGCAGGCTTCCGAATCTACAAGTTTGGTGATGCGATGACGCTTTCGGGACGATCACCGATCTATCTGCGTGTTGAGTACTGGAGCAATTGGGATGGTACAATGTCTGCGGTTTCTGGTCAGTCTACTCGTTCGATGGTCAAGTATCCACACGTTGTTGTCTACTTTGGTGGATCGGTCACTGCAGCTGGTGTGGTAAGCGGCGGCACAATGTGGCAATCGTCGCCAGCGTATCCCAACACGGCATACGGCAGAGGTAGCGCGTCTGGATTCACACAGATCCCAGCATGCCAGAACTACATCTACACCGATACTGTAAAAGGACATTTCGCTATCGTATTTGGCGCGTCTTCCAAGAGTGGAGCATTGCCAAATCCGTCGGGCAACTTCCAAAAGTTTGATGCTGTGAGATTCGCCTTTGAGCGTGAGTACAACATCGCCACAGGCGAAACGATGCCAAACTTCACGACATTCATGATCACAAGTGATCAGGCTTGGTCACTGACAGCCGCATCTTCTGCCTATACAGGACGTTGGGTGAACTTTGATCACATCCAGAATGTTTGGATCACGCCATACGATCGCACGATGTGTCGCTATCTAGGACAGTTCCAAGACGGCGGGGTGTCAGCATATACGATGTATCAGCCATTCATGCTCTTCTCGAGCACGCAAGGGCTGGTTCCGTCTCGTTTCATGTATCTGTACAGAGCCGGATCAAAGACGCCATACACAGTATCGACTGTGTCAGTGAATGGTGTTCCTGTGGATATGATGCACCTCCCATATCTGAGATGTGGTGTTATGGGGTCTTTGACTTCAGACATGAACTCATCGACTTCGATTGACGATTCATCTAACTGGCTGAGAAACACAGCCGTCTGCTACGCAATGAGTCAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
fd773a248ad391cc1085a8e05482985bbcb76a985af6a2836160b2f66ba05681
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4831
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of bacteriophage vB_SmaM_Ps15 infective to Stenotrophomonas maltophila clinical ocular isolates Damnjanovic,D., Vazquez-Campos,X., Elliott,L., Willcox,M. and Bridge,W.J. 2020-06-11 — GenBank