Protein

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Genbank accession
CAB4170034.1 [GenBank]
Protein name
Pectate lyase superfamily protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MSESKTFTSGTLINSGWLNAVDATTYEALGDGSLNPPTTRTQVTTNIQSLATGTGAVARSVQSKLNDFVSVKDFGATGNGTTNDTVAIQAAMLSTSTAGKRLFFPAGIYLVTDSLIMCQYTNIYGEYNYQGWNDSTNNRSTIIQFTPTSAKSLFVASTSNGTSDGFVSDISISDMCLFGDNTANSQSAIYASQVIYSAFKNLKIWNFQTGVRCAQTINNRFENLNIGYCTTACVTYNESTPTTDVWEQCTFNKSPIGVDTSDNVAIGIRFNNCLFEDLTTYGVNLSKGCSSWAFTNCYSENVPSSNLAYGSMFHIGFDGTAVGVVSSLDIIGGVYQGSSVYASTAGTWLNVDESYSVKVVAPHILNIGTIVRTTANTVANAITFLGNSIQGTGAFYSGPTGKLTGIYSQYELNNGEGNIVILRGRDVVVDQAYFTNATYNAVTVAALPVVSSVGAGAAAFVNNASLNTFGSVAVTSSTALASVVITGTAGQFSCTAATLQIGMQLNISGTFGGTGSITGYTNPKSYYVIATNGTTTFTLSATAGGAAITTTVGTPTGLTYLIGYMVPVYSDGMSWRIG
Physico‐chemical
properties
protein length:578 AA
molecular weight: 60599,73190 Da
isoelectric point:4,75847
aromaticity:0,10381
hydropathy:0,11419

Domains

Domains [InterPro]
IPR012334
STR
38–311
IPR012334
IPR011050
STR
67–439
IPR011050
IPR024535
ENZ
68–301
IPR024535
CAB4170034.1
1 578
Architecture
STR
STR 38-439 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
CAB4170034.1
1 578
Domain Start End Length (AA) Confidence
N-terminal 1 82 82 0,9681
Central domain 83 473 392 0,9530
C-terminal 474 578 104 0,9433
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-82
Central
83-473
C-terminal
474-578

Taxonomy

  Name Taxonomy ID Lineage
Phage uncultured Caudovirales phage
[NCBI] 		2100421 Uroviricota > Caudoviricetes > Peduoviridae > Maltschvirus maltsch >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAB4170034.1 [NCBI]
Genbank nucleotide accession
LR796855 [NCBI]
CDS location
range 20361 -> 22097
strand +
CDS
ATGAGTGAAAGCAAAACATTTACTAGCGGTACGTTGATTAACTCTGGGTGGCTTAACGCGGTTGATGCAACTACGTATGAAGCTCTTGGAGATGGGAGTCTTAATCCCCCGACTACACGCACACAAGTTACCACTAACATTCAATCACTAGCTACCGGCACAGGCGCTGTAGCAAGATCGGTTCAGTCTAAATTAAATGATTTTGTGAGCGTTAAAGATTTTGGTGCAACGGGTAACGGAACTACAAACGACACTGTGGCAATTCAAGCCGCAATGCTCTCCACTTCTACTGCTGGCAAACGGTTGTTTTTTCCGGCTGGCATTTACCTTGTTACTGACAGCTTAATTATGTGCCAGTACACCAATATATATGGTGAGTACAACTATCAAGGCTGGAACGATAGCACCAACAATCGCTCAACCATTATTCAGTTCACACCTACTTCTGCCAAATCACTATTTGTAGCGTCCACATCTAACGGCACATCTGATGGTTTTGTTTCCGACATTAGCATTTCGGATATGTGTTTGTTTGGCGATAATACAGCTAACTCCCAAAGCGCCATTTACGCTAGCCAAGTAATTTATTCGGCGTTTAAGAACCTAAAAATTTGGAATTTTCAAACTGGCGTAAGGTGCGCGCAAACAATCAACAACAGGTTTGAAAATTTAAATATTGGCTATTGCACAACAGCCTGCGTGACCTATAACGAAAGCACACCGACAACAGATGTGTGGGAACAATGCACTTTCAATAAATCTCCTATTGGAGTAGATACAAGTGACAATGTTGCTATTGGCATTAGATTCAATAACTGTTTGTTTGAAGACCTAACCACCTACGGCGTTAATTTGTCAAAAGGATGTAGTTCTTGGGCATTTACAAACTGTTATTCGGAGAATGTTCCTTCTTCCAATCTTGCCTATGGATCAATGTTTCATATTGGATTTGATGGAACTGCCGTAGGTGTTGTTTCTTCTCTTGACATTATTGGCGGCGTTTATCAAGGAAGTAGTGTTTACGCATCAACGGCGGGTACTTGGCTTAATGTTGATGAATCCTATAGCGTTAAAGTAGTTGCCCCCCACATTTTAAATATTGGCACCATTGTACGAACCACGGCAAATACTGTTGCTAACGCAATTACTTTTTTAGGCAACAGCATACAAGGAACGGGTGCTTTTTACTCAGGGCCAACAGGAAAACTTACCGGTATTTATTCACAGTATGAATTAAATAACGGTGAGGGAAACATCGTAATTCTAAGAGGACGCGATGTTGTAGTAGATCAAGCATATTTTACTAATGCTACTTATAACGCTGTAACTGTAGCAGCTTTGCCCGTAGTTTCTTCTGTTGGTGCAGGTGCAGCCGCCTTTGTGAACAACGCCAGTCTTAATACCTTTGGTTCTGTAGCCGTAACCAGTTCAACGGCACTGGCATCGGTAGTAATTACAGGAACCGCAGGACAGTTTAGTTGCACTGCCGCAACTCTGCAAATTGGTATGCAACTCAATATCTCAGGAACCTTTGGTGGAACTGGAAGCATTACAGGCTACACAAATCCAAAAAGTTATTACGTTATTGCAACCAATGGAACAACCACGTTTACATTGTCTGCAACTGCTGGTGGGGCCGCAATAACTACGACAGTGGGAACACCGACTGGGTTGACCTATTTAATAGGTTACATGGTGCCTGTCTACAGTGATGGAATGAGCTGGAGAATTGGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
24178ab0a94688bf25b6ef519c04e32d98eddc847e6cf5ba14ccfbd23ec6ac2a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7197
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50