Protein

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Genbank accession
YP_009140963.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
Protein sequence
MAIVFPASPSINETFTEGSITYKCVGTNPIKWIGLGVTPADRLVEGSNKLEIDASNNLVWTGNNVGIQNTSPDEALEVGAGTVDGGLKVSGQSSSVTSDGLTVDWESSSNSTRIFSEPSSGGSSAIRLFTTNSGTRAERLRIDSSGRLLIGESDPVSFGSSSTDIGRVQIIGDDFFESRFDQIRFQTGANGASQTIAHARGTFAAPTTLVEGDEIGKVRYQGHDGTDFNNIGAEMRVVCDGAVSSNIMPAKFLWRTMNATGTEADRLTLDKDGRLMPGATNTQDLGANSLRWRNVYAQSYRFNDAGGRIDYNTTANTMEIIVGGTQQAEFTDGSFVPVSSADTIALGTVAKRWGAIRGGSLDINGATNTVNIEHTGGSGLNIKRDSKDLSFNANYSAANTHASIELTSGMDLGFYLGGSERVRFESNGEVRFTGQVRLTEERPFLRLISSAPTSNTDPRAIINFESQSSDNXEDQYRINFWEGNSSGETNNANASIRYNGSTSDGGDGSIRFCNENNNRLFSVNRLGGGNLLGTLAQSSSDIRLKENITPIENALEKVNSLSGFTYTWNQEAQDAGLKGDEHDCVQVGVSAQDVQEVQPEAVKPSPVDREKYITVQYEKLVPLLIEAIKELKEEVEELKRTK
Physico‐chemical
properties
protein length:642 AA
molecular weight: 69040,01670 Da
isoelectric point:4,77700
aromaticity:0,07020
hydropathy:-0,45445

Domains

Domains [InterPro]
DC_0673
STR
8–641
DC_0673
IPR030392
CHP
540–642
IPR030392
IPR030392
CHP
540–603
IPR030392 Coil
YP_009140963.1
1 642
Architecture
STR
STR 8-642
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009140963.1
1 642
Domain Start End Length (AA) Confidence
N-terminal 1 25 25 0,7457
Central domain 26 224 200 0,0662
C-terminal 225 642 417 0,9575
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-25
Central
26-224
C-terminal
225-642

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage ACG-2014i
[NCBI] 		1493513 Uroviricota > Caudoviricetes > Pantevenvirales > Chalconvirus > Chalconvirus acg2014i
Host Synechococcus sp. WH 7803
[NCBI] 		32051 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009140963.1 [NCBI]
Genbank nucleotide accession
NC_027132 [NCBI]
CDS location
range 171478 -> 173406
strand +
CDS
ATGGCAATTGTATTTCCAGCAAGTCCTAGTATAAATGAGACCTTTACTGAAGGATCTATCACATACAAATGTGTTGGAACAAATCCAATTAAGTGGATTGGACTGGGTGTTACTCCTGCTGATAGATTAGTTGAGGGTAGCAATAAGTTAGAGATTGATGCTAGTAATAATCTAGTTTGGACTGGTAATAATGTTGGTATTCAAAATACTAGTCCAGACGAGGCATTGGAAGTTGGTGCTGGCACTGTTGATGGTGGACTAAAGGTAAGCGGTCAATCAAGTAGTGTTACTTCTGACGGTCTTACAGTTGATTGGGAATCCTCTTCAAATAGCACCAGAATTTTTAGTGAACCTTCTTCAGGGGGTAGTTCCGCAATAAGACTTTTTACTACAAATTCTGGAACCAGAGCAGAAAGACTTCGTATAGATTCAAGTGGTCGGTTGCTGATTGGTGAATCCGATCCTGTTTCTTTTGGGTCTAGCAGTACTGATATTGGAAGAGTGCAGATAATTGGAGATGATTTCTTTGAATCCAGATTTGATCAAATTAGATTTCAAACTGGTGCAAATGGAGCATCTCAAACTATTGCTCATGCTAGAGGAACATTTGCTGCTCCTACTACTCTTGTAGAAGGTGATGAGATTGGTAAAGTTAGATATCAAGGTCATGATGGAACTGACTTTAACAATATTGGTGCTGAAATGCGAGTTGTATGCGATGGCGCTGTCTCATCCAATATTATGCCAGCTAAGTTTCTTTGGAGAACAATGAATGCTACTGGAACTGAAGCAGATAGACTAACTCTTGATAAAGATGGTCGCTTGATGCCTGGTGCTACCAATACTCAGGATCTTGGAGCAAATTCATTACGTTGGAGAAATGTCTACGCTCAGTCTTATAGATTTAATGATGCTGGTGGAAGAATTGATTACAACACCACTGCCAACACGATGGAGATTATTGTTGGCGGCACTCAGCAAGCAGAATTTACTGATGGTTCTTTTGTTCCTGTGTCTTCAGCAGATACTATAGCACTTGGTACGGTTGCTAAGAGATGGGGAGCTATTCGTGGTGGATCATTGGATATTAATGGTGCCACAAACACTGTAAATATTGAACACACTGGTGGTTCTGGTCTTAACATTAAGAGAGATAGTAAAGACTTATCTTTCAACGCTAATTATAGTGCTGCTAATACTCACGCATCTATTGAACTTACCAGTGGCATGGATCTTGGGTTTTACCTAGGTGGTTCTGAGAGGGTTAGATTTGAGAGCAATGGTGAAGTAAGATTTACTGGTCAGGTAAGACTTACAGAAGAGCGTCCATTCCTTAGACTTATTTCTAGCGCACCAACTTCTAACACAGACCCTAGAGCTATTATTAACTTTGAATCTCAGAGTAGTGATAATKATGAGGACCAGTACCGAATCAACTTCTGGGAAGGAAATAGTAGTGGTGAAACTAATAATGCTAATGCTTCTATTAGATACAATGGTAGCACTAGTGATGGTGGTGATGGATCAATTAGATTCTGTAATGAAAATAACAATAGACTCTTCTCTGTTAATAGATTAGGTGGTGGTAATCTTCTTGGCACCCTTGCACAGAGCAGTTCTGATATTAGACTGAAGGAAAATATTACTCCTATTGAAAATGCACTGGAAAAAGTTAATTCATTGTCTGGATTTACATACACTTGGAACCAAGAAGCACAGGATGCTGGATTGAAAGGTGATGAGCATGATTGTGTACAGGTTGGTGTATCTGCTCAGGATGTTCAGGAAGTACAACCAGAAGCAGTTAAACCATCTCCTGTTGATAGAGAGAAGTATATTACTGTACAGTATGAAAAACTAGTTCCTCTACTCATTGAAGCAATCAAAGAATTGAAAGAAGAAGTAGAAGAATTAAAGCGCACTAAATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
fe7fde667133b379720f11d88a1732a75217d714e864688e097b31ca7b1457fc
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7077
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Ecological redundancy of diverse viral populations within a natural community Gregory,A.C., LaButti,K., Copeland,A., Woyke,T. and Sullivan,M.B. 2015-03-20 — GenBank