Protein

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Genbank accession
QZI92146.1 [GenBank]
Protein name
chitin-binding type-3 domain-containing protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MPQITQRSFTSGEIAPALQSRADLTKYATGLHLCENFLVRAQGGVYSRPGFRFVGELDNSARVGRLIPFSFNTEQTYMLVFEHLKVRVIKDGGFVLDGGGPAIFELATPYTESQLPRLGFTQNADVMTIVHPDHDPRNLNRMADDDWSLTTIDYAPTVDSPTFSSGSVDKAITGISQSNPAVVTAVAHGFVTGNLISINGVAGMTQVNGRSFIITALTNDTFELNGEDSTGHDPYTSGGTASRQNGATTIGEGFGDFDKTYTYVVTAVDAEGSESLASAEVSITTGSLATTAGVRLTWDTVPEAEYYRVYKDPSVGTGIYGWIGDSNNNSFDDYNIAPITSDAPPSDRQPFNGEGNKPSTVTYYQQRQVFANTYNEPQATFTTQTNNFDSLRVSNPARDDDAVTFTIAARQVNEIRHLLPLDSLILLTSGGEWIMTEGQDRVLTPATVGVRIQSYNGCSIIPPVVINSTALYLQEKGTRLRDLGYEFSSDKYTGNDLSLMSEHLFEGHTIVSMAYADEPYSIVWCVRDDGVLLGLTYQREHQVWGWHKHTTQGEFEYVATVTEGSRDAVYAIVKRTINGSVVRYVERLEPRESINAEDCFYLDSGLTYDGAPATVISGLDHLNGETVSILTDGYTVPDQVVEDGKVTLVRAASKVHVGLSYLPAIETLDIDTPSPSQTLKAQSVSVSKVTIEVDGSRGGWVGPRQDSGSPAPMSEIKPRFDSDNYDPIALKTYKSEVFIQPQWGKGGGVRIEQRAPLPMSILSIIPQIDIGGN
Physico‐chemical
properties
protein length:773 AA
molecular weight: 84163,50870 Da
isoelectric point:4,71550
aromaticity:0,08926
hydropathy:-0,27464

Domains

Domains [InterPro]
DC_0058
STR
1–768
DC_0058
IPR042302
STR
168–243
IPR042302
IPR032418
RBD
179–242
IPR032418
QZI92146.1
1 773
Architecture
STR
STR 1-768 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QZI92146.1
1 773
Domain Start End Length (AA) Confidence
N-terminal 1 156 156 0,9938
Central domain 157 359 204 0,1494
C-terminal 360 773 413 0,0776
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-156
Central
157-359
C-terminal
360-773

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage PS25B.1
[NCBI] 		2859358 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio crassostreae
[NCBI] 		246167 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QZI92146.1 [NCBI]
Genbank nucleotide accession
MW824406 [NCBI]
CDS location
range 22261 -> 24582
strand -
CDS
ATGCCGCAAATCACACAGCGTAGCTTTACATCAGGTGAAATTGCGCCAGCATTACAATCTCGTGCTGACCTCACCAAGTACGCTACAGGTTTACATCTTTGTGAGAACTTCCTGGTGCGTGCACAAGGTGGTGTTTACTCACGTCCTGGGTTCAGGTTCGTCGGTGAGCTTGATAATTCTGCTCGTGTGGGTCGCCTTATCCCGTTCAGCTTTAACACTGAACAGACTTACATGCTCGTGTTTGAGCACTTGAAAGTCCGTGTGATTAAAGACGGTGGGTTCGTGCTTGACGGTGGTGGACCTGCAATCTTTGAACTTGCTACACCTTACACTGAATCACAATTACCACGTTTAGGGTTCACACAGAACGCTGATGTGATGACAATCGTTCACCCTGACCATGACCCTCGTAATCTAAACCGCATGGCTGATGATGATTGGTCATTGACGACAATTGATTATGCACCGACTGTTGACAGCCCAACGTTCAGCAGTGGGTCAGTGGATAAAGCAATCACAGGTATTTCTCAATCGAACCCTGCTGTGGTAACTGCTGTGGCTCATGGGTTCGTCACTGGTAACCTGATCAGCATCAACGGTGTAGCAGGTATGACGCAAGTGAATGGTCGCTCGTTCATCATCACAGCGTTAACCAACGACACATTTGAGCTTAACGGTGAAGACTCCACAGGTCACGACCCGTACACGTCAGGTGGTACAGCCAGTCGCCAGAACGGTGCAACAACCATCGGTGAAGGTTTCGGTGACTTCGACAAGACTTACACATACGTTGTGACTGCTGTTGATGCTGAAGGTTCTGAATCATTGGCATCTGCTGAAGTGAGTATCACAACAGGTTCACTGGCAACCACTGCTGGTGTACGTTTGACCTGGGACACTGTACCTGAAGCTGAGTATTATCGTGTTTACAAAGACCCTTCAGTGGGTACTGGTATCTACGGTTGGATCGGTGACTCGAACAATAATTCATTCGATGACTACAACATTGCACCGATTACTAGTGATGCACCACCAAGTGACAGACAACCGTTCAATGGTGAAGGTAACAAACCGTCAACTGTGACGTACTACCAACAGCGTCAAGTGTTCGCTAACACATACAATGAACCACAAGCGACATTCACCACTCAGACAAACAACTTCGATTCACTGCGAGTGTCTAACCCTGCTCGTGATGATGATGCGGTGACATTCACCATTGCTGCACGACAGGTCAATGAAATTCGTCACCTGCTACCGCTTGATTCGCTTATTCTGCTGACATCCGGTGGTGAGTGGATCATGACTGAAGGTCAAGACAGAGTTCTGACACCTGCAACAGTGGGTGTGCGTATCCAGTCATACAACGGTTGTTCAATCATCCCACCGGTTGTGATCAACAGTACAGCGTTATACCTGCAAGAGAAAGGTACACGACTGCGTGACCTGGGTTATGAGTTCAGCAGTGACAAGTACACAGGTAACGATTTATCACTGATGTCAGAACACCTGTTTGAAGGTCACACGATTGTATCAATGGCGTATGCAGATGAACCATACAGCATTGTGTGGTGTGTCCGTGATGACGGTGTACTGTTGGGTTTAACTTATCAGCGTGAACATCAAGTGTGGGGTTGGCACAAGCACACGACACAGGGTGAATTTGAATACGTCGCAACAGTCACTGAAGGAAGTCGTGACGCTGTGTATGCTATCGTGAAGCGCACAATCAATGGTTCGGTAGTTCGATATGTTGAGCGACTTGAACCACGTGAGTCAATCAATGCTGAAGACTGTTTCTATCTCGATTCTGGTCTGACGTATGACGGTGCACCTGCAACCGTGATCAGTGGTCTTGACCATTTGAACGGTGAGACTGTGAGTATTCTGACTGACGGTTACACTGTACCTGACCAGGTTGTTGAAGATGGTAAGGTCACACTTGTACGAGCTGCTTCAAAGGTTCATGTGGGTCTGAGCTACTTACCTGCAATTGAAACATTGGACATTGACACACCGTCACCAAGTCAGACATTGAAAGCACAATCAGTCTCGGTGTCGAAAGTCACTATTGAGGTTGATGGTTCTCGTGGCGGTTGGGTAGGTCCACGTCAAGACAGTGGTTCACCTGCACCAATGAGTGAGATTAAACCTCGTTTCGACAGTGACAACTATGACCCGATTGCATTGAAGACTTACAAATCAGAAGTGTTCATTCAACCGCAATGGGGCAAAGGTGGTGGGGTTCGCATTGAACAGCGTGCACCGTTACCAATGTCTATACTTTCAATAATTCCACAAATCGACATAGGCGGTAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f5f2096453d06a8c78413971be4744e99c96bbf6194505fba78775b312dce6f5
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2932
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50