Protein

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Genbank accession
WMM95453.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MATLNLGRIKPVFRGAYAGGTAYVVDDIVTSGNETFICIQAGTGNATSNASYWTKLAAKGADGTDVGATLTTQGDILYRDGSGLQRLAAGTSGQFLKTQGSGANPTWAGVTSAILQMKSVSFGDTFSTSTSTHTGTSATECTPATLTITPTSATSLIRVDYTFQCTHDGDYMGLYFLTYNHSGISETSLENDHTYGSTRSFDRSTNTTSDTGFGISGTVFLDPQTTNAVTVKHRFSSTNSGHTTYINQCANGNTSNDPSAGVCTVVLTEIAGSSITHSKVNNIVGD
Physico‐chemical
properties
protein length:286 AA
molecular weight: 29800,25690 Da
isoelectric point:5,55308
aromaticity:0,08042
hydropathy:-0,21538

Domains

Domains [InterPro]
DC_0393
STR
1–286
DC_0393
G3DSA:2.10.10.20
ATT
16–58
G3DSA:2.10.10.20
WMM95453.1
1 286
Architecture
STR
ATT
STR
STR 1-15 | ATT 16-58 | STR 59-286
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WMM95453.1
1 286
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,9167
Central domain 11 208 199 0,0027
C-terminal 209 286 77 0,9993
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-208
C-terminal
209-286

Taxonomy

  Name Taxonomy ID Lineage
Phage Pelagibacter phage HTVC048P
[NCBI] 		3072834 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Candidatus Pelagibacter ubique HTCC1062
[NCBI] 		335992 Bacteria > Proteobacteria > Alphaproteobacteria > Pelagibacterales > Pelagibacteraceae > Candidatus Pelagibacter

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WMM95453.1 [NCBI]
Genbank nucleotide accession
OR420745.1 [NCBI]
CDS location
range 37020 -> 37880
strand +
CDS
ATGGCAACATTAAATTTAGGAAGAATTAAGCCAGTATTCAGAGGAGCTTATGCAGGTGGAACTGCGTATGTAGTTGATGACATTGTAACGTCAGGAAACGAAACTTTCATTTGTATACAGGCAGGTACAGGTAACGCTACGTCCAACGCTTCCTATTGGACAAAATTAGCGGCTAAAGGTGCTGATGGTACTGATGTAGGTGCTACATTAACAACACAAGGCGATATACTTTACAGAGATGGAAGTGGATTACAAAGACTAGCGGCAGGTACTTCAGGACAATTCTTAAAAACACAAGGTTCTGGTGCTAATCCTACTTGGGCAGGTGTTACAAGTGCAATACTACAAATGAAAAGTGTGTCATTTGGAGATACATTTAGCACGAGTACTTCAACTCACACAGGCACGAGTGCTACTGAATGCACACCTGCAACTTTAACAATAACACCGACTTCAGCGACAAGTTTAATCAGAGTTGATTATACTTTTCAATGTACCCATGATGGAGATTATATGGGTCTTTATTTCTTGACTTATAATCACTCAGGAATTTCAGAAACATCATTAGAAAATGACCACACTTATGGTTCTACAAGGTCGTTTGACCGAAGTACTAATACTACTTCTGATACTGGGTTTGGAATATCTGGAACAGTATTTCTTGACCCACAAACTACAAATGCTGTTACAGTCAAACATAGATTTTCAAGTACTAACAGTGGACACACAACATACATTAATCAATGTGCTAATGGTAATACTTCCAATGACCCTTCGGCAGGGGTTTGTACTGTTGTATTAACAGAAATTGCAGGTTCAAGTATTACGCACAGCAAAGTTAACAATATAGTAGGAGACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
808c7134be0d738e90af9e4a43ce1b4c282ef20b083ccb411a0d6b229566a2e8
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8121
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50