Protein

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Genbank accession
ARB06040.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,91
Protein sequence
MAQLMAGFGQGFVQTQVLSENNSVKYKLSVAGSNATSSPNPAYILLNDKPISSIQHQNGLNVWELDTTIGAIVSRKIYAFGVNDSASANIAFIEYMNSLTADTVIIITTSGNVNSSPSVDNWFKNAGSTNWFNNEILRNYKGSYAGIYRPRFKKVVSENRCYTDGSIFDSRAYLEIVYDTINDIGATGFPYRVCFDTNEYETDSEIDIKRYPNGLFVTPYSDYLMSPGQKYMITFELFASASLISSGKTTQMNIRWFNDNAFVSGSSYEVNSTFGDQWVKFEHIIDVPANTNGFTIVASRTNSVLISDGTGGVRNVIMAQVSRGDVPITSAAFGVNGIRMNKGIDGTTDKLLILPDVEDDPTGDIYSAEFIEVAPL
Physico‐chemical
properties
protein length:376 AA
molecular weight: 41305,65380 Da
isoelectric point:4,68503
aromaticity:0,11436
hydropathy:-0,14548

Domains

Domains [InterPro]
DC_0912
STR
1–375
DC_0912
PS52031
LEC
22–193
PS52031
IPR039477
STR
58–145
IPR039477
ARB06040.1
1 376
Architecture
STR
STR 1-375 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ARB06040.1
1 376
Domain Start End Length (AA) Confidence
N-terminal 1 323 323 0,1473
Central domain 324 365 43 0,4061
C-terminal 366 376 10 0,9886
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-323
Central
324-365
C-terminal
366-376

Taxonomy

  Name Taxonomy ID Lineage
Phage Yersinia phage fHe-Yen9-01
[NCBI] 		1965363 Uroviricota > Caudoviricetes > Pantevenvirales > Tevenvirinae > Tegunavirus
Host Yersinia enterocolitica
[NCBI] 		630 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ARB06040.1 [NCBI]
Genbank nucleotide accession
KY593455 [NCBI]
CDS location
range 158561 -> 159691
strand +
CDS
ATGGCACAACTTATGGCTGGATTTGGACAGGGATTTGTCCAAACTCAAGTATTATCTGAGAATAATTCAGTTAAATATAAACTTAGTGTAGCGGGGTCAAATGCGACCTCGTCACCTAATCCCGCTTATATTTTATTGAACGATAAACCTATCAGTTCCATACAACATCAAAATGGACTTAACGTATGGGAATTAGACACAACAATTGGAGCTATTGTTTCTAGAAAAATCTACGCATTCGGGGTTAATGATTCAGCTTCGGCTAATATTGCTTTTATAGAATATATGAATTCTTTAACAGCTGACACTGTAATAATTATTACGACATCAGGTAATGTTAATTCAAGCCCTAGTGTTGATAATTGGTTTAAAAATGCTGGTTCTACTAATTGGTTCAATAACGAAATACTTAGAAACTATAAAGGAAGTTATGCAGGCATATATCGTCCTAGATTTAAAAAAGTAGTTTCTGAAAATAGATGTTATACTGATGGGTCGATATTTGATTCAAGAGCATATCTAGAAATAGTTTACGATACAATTAATGATATTGGTGCCACAGGATTTCCGTATAGAGTTTGTTTTGATACAAACGAATATGAAACTGATTCAGAAATAGATATAAAAAGATACCCTAATGGATTATTTGTTACTCCATATTCAGATTATTTGATGTCTCCTGGACAAAAATATATGATAACATTTGAATTATTTGCTTCGGCCAGTTTAATATCATCTGGCAAAACAACACAAATGAATATAAGATGGTTTAACGATAATGCTTTTGTGTCAGGTTCATCTTATGAAGTTAATAGCACTTTTGGGGACCAATGGGTCAAGTTTGAACATATAATTGACGTTCCTGCAAACACTAATGGCTTTACTATCGTAGCATCTAGAACCAACTCAGTGTTAATATCGGACGGCACAGGCGGCGTAAGGAACGTTATTATGGCACAAGTAAGCCGCGGCGATGTCCCTATAACTTCTGCGGCTTTCGGGGTCAATGGTATAAGAATGAATAAAGGAATTGATGGCACAACTGATAAATTGCTTATTTTACCTGATGTGGAAGATGACCCAACTGGCGATATCTATTCAGCAGAATTCATAGAGGTTGCTCCTTTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
cae88c2e3e85565478eb7c6fdbf679f419e9c08a940249abbc575f63c805b3d2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6224
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization and complete genome sequence of Yersinia bacteriophage, fHe-Yen9-01 Jun,J.W., Wicklund,A. and Skurnik,M. 2013-12 — GenBank