Protein
View in Explore- Genbank accession
- CAL1777079.1 [GenBank]
- Protein name
- tail protein
- RBP type
-
TSP
- Protein sequence
-
MILEGVYPSFLKGVSQQTPQERNDGQLGAQLNLLSDAVTGLRRRGGVKFQAKLTGIPNSSYIRLIDINGVNYIMIVDTVTGTLKIYNFDGSLLKAHQTDYLKASNGKASIRSTVSRNNCFVLNTEQVITKTPIGGTNPTPNPSTMGYISIRSGQFSKMYSVDIKSGTYSVSLQVSTHGTDAALASPEYVATKFMENITANTTLNSRYDVVREGSTVALKAKSATDTNLLVIESGTGSTYIQTSNSSRVQGKQDIIANLPNILDKYIIAVGTVGNSAYYQYNANSSTWKECGIYEEPYKFTNEPIYWYFDDTDTVQVKSLDIQPRAAGDDDNNPLPKFVDFGITGISAYQSRLVLLSGSYVNMSATADFNVYMRTTVEELQDDDPIEVSSTALSAAQFEYAVPYNKDLVLLAQNQQAVIPANSTVLTPKTAVIYPSSKANISMASEPQVVSRSLYYTYQRGTDYYQVGEMIPNDYADAQYYAQNLADHIPLYATGVCTSITGSTTDNMAVFSSDQKELLVHQYLWAGEDRPLMSFHKWELPYDVLHVQFLQEYLVLFMDVGDDLVVGTINVQLNQLDNKPIPFLDIYQYVDIVDGEGTLPEFLPAGDLVAAVYSSETMRHAMVQYEIEGTKIKCQFNGRIYLGVPYESSLTLTPPFVKDDKGRVVAGSGSTVVDLTMTFKGTGEFEYHVSDAYGDVFDGETSAQAWSEAQLGYTRVNTVSDVKFSCGTLLSSTEFSIRTKGTTELNIISASYNIRVPNRGRRRL
- Physico‐chemical
properties -
protein length: 763 AA molecular weight: 84160,42240 Da isoelectric point: 4,90011 aromaticity: 0,10092 hydropathy: -0,22176
Domains
Domains [InterPro]
DC_0058
STR
1–763
STR
1–763
IPR058003
TTP
7–761
TTP
7–761
1
763
Architecture
STR 1-763
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
763
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 133 | 133 | 0,9710 |
| Central domain | 134 | 338 | 206 | 0,1079 |
| C-terminal | 339 | 763 | 424 | 0,2143 |
Note: Constraints were applied during segmentation.
Fixed 5 C-terminal predictions appearing before Central domain
Fixed 5 C-terminal predictions appearing before Central domain
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-133
1-133
Central
134-338
134-338
C-terminal
339-763
339-763
Taxonomy
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
CAL1777079.1
[NCBI]
Genbank nucleotide accession
OZ038338
[NCBI]
CDS location
range 15318 -> 17609
strand +
strand +
CDS
ATGATTCTTGAGGGAGTGTACCCGTCATTCTTGAAAGGTGTATCACAGCAAACACCTCAAGAGCGTAATGACGGGCAATTAGGCGCACAGCTTAATTTATTATCTGATGCTGTAACAGGTTTACGTAGACGTGGTGGGGTTAAGTTCCAAGCTAAGTTGACAGGTATTCCTAATAGTAGCTATATACGTTTAATTGACATCAATGGTGTTAATTACATTATGATCGTAGATACGGTTACAGGTACTTTGAAGATTTATAATTTTGATGGTTCTCTACTTAAAGCACATCAAACCGATTATCTTAAAGCCTCCAATGGTAAGGCTAGTATCCGCAGTACAGTCTCACGTAATAATTGCTTCGTATTAAACACTGAACAAGTTATTACTAAGACACCTATAGGCGGTACTAACCCAACACCTAACCCAAGTACTATGGGGTATATCAGTATTAGGTCTGGGCAGTTCTCTAAGATGTACTCAGTGGACATTAAGTCTGGAACATACTCCGTAAGTTTACAAGTATCTACTCACGGTACAGATGCAGCATTAGCGTCCCCTGAGTATGTCGCTACTAAGTTTATGGAAAACATAACCGCAAACACAACATTAAATAGTCGTTATGATGTTGTACGTGAGGGTAGCACAGTTGCACTTAAAGCTAAATCTGCTACAGATACTAACTTATTAGTAATAGAGTCTGGTACAGGTAGTACTTATATTCAGACGAGTAATTCTAGTCGTGTACAGGGTAAGCAAGATATTATTGCTAATCTACCTAATATCTTAGATAAGTATATTATTGCAGTAGGTACAGTTGGTAATTCAGCCTACTATCAATATAATGCTAATTCTAGTACTTGGAAAGAGTGTGGTATTTATGAAGAACCTTATAAGTTCACTAACGAACCTATTTACTGGTACTTTGATGATACCGACACAGTTCAGGTTAAGAGCTTAGATATTCAACCACGCGCAGCAGGTGATGATGATAATAACCCATTACCTAAGTTTGTGGATTTTGGTATTACAGGTATTAGTGCGTATCAATCTCGTTTAGTACTGCTTAGTGGTTCATACGTTAATATGAGTGCTACAGCAGATTTCAACGTGTATATGCGTACCACTGTAGAGGAATTACAAGATGATGACCCTATTGAAGTGTCTAGTACTGCTTTAAGTGCTGCACAGTTTGAATACGCTGTTCCGTACAATAAAGATTTAGTTTTATTGGCTCAGAACCAACAAGCTGTTATCCCAGCCAATAGTACTGTACTTACACCTAAGACGGCTGTTATCTACCCAAGTTCAAAAGCTAATATTAGTATGGCTAGTGAACCACAGGTAGTGTCTCGTAGTTTGTATTATACATATCAACGGGGTACAGATTATTATCAAGTTGGTGAGATGATTCCTAATGATTATGCAGATGCTCAGTACTATGCACAGAACTTAGCAGACCATATTCCGTTATATGCTACGGGTGTTTGTACTTCAATCACAGGTAGTACTACTGATAATATGGCAGTGTTCAGTTCTGACCAAAAAGAATTACTTGTACACCAGTACTTATGGGCAGGTGAAGATCGTCCGTTAATGAGCTTCCATAAATGGGAATTACCTTATGATGTGCTTCACGTACAATTTCTACAAGAGTATTTAGTATTATTTATGGATGTGGGTGATGATTTAGTGGTTGGTACTATTAACGTACAGTTGAACCAACTAGACAATAAACCTATCCCATTCTTAGACATTTACCAATACGTAGATATTGTAGACGGGGAAGGTACATTACCTGAGTTCTTACCAGCAGGTGATTTAGTAGCTGCGGTGTACAGTTCTGAGACTATGCGTCATGCTATGGTTCAATATGAAATCGAAGGTACTAAGATTAAGTGTCAATTCAATGGACGTATTTATCTAGGTGTACCTTATGAAAGTTCACTCACACTAACACCTCCTTTTGTTAAAGATGATAAAGGTCGCGTAGTTGCTGGAAGTGGTAGTACAGTGGTTGATCTTACAATGACATTCAAAGGCACAGGTGAGTTTGAGTACCATGTTTCTGATGCTTATGGTGATGTGTTTGATGGTGAAACGTCTGCACAAGCTTGGTCGGAGGCACAACTAGGGTATACGAGAGTAAACACAGTTAGTGATGTTAAGTTCTCTTGTGGTACGTTATTGAGTTCCACTGAGTTTAGTATACGTACTAAAGGTACAACCGAATTAAACATCATTAGTGCTAGTTATAATATCCGTGTACCAAACAGAGGACGGAGACGTTTATAA
Genome Context
Genome Context
Tertiary structure
PDB ID
59bb3ffd80981b709abeacd16e2a7432ca9284ee749714cb84edbfa1402f1a72
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50