Protein

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Genbank accession
YP_010102737.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,88
Protein sequence
MGFGPAYGTGRGGGAVDIFTKKDGNPAIFANTGARDTYFTTNPDELAKVKSSGNAVAIGTTDQVTAAYVYKGSAWQAIATNFKGDKGAPGAPGDGIDYSHLKDNQLPKWDSKTKMFISSGVRSLEDGSISLEPASMHLGSHTISSSAENVTFTNIVTRKTYSPLWQEVAPGAKTGYIRAHGEYQDVILGADGSVDLLNPSFIYTAPTDASIFGATIELSRDATNVEIHVEFNNEELWLARLGDLSAGERKILFSNPADFKMGNNYRVIIDSSDGSEVILKGSNFNTPKATLHAAKWEDRVVTSMREGALETGDVPVWSEKENEFIKNSLSVTPAGGLEVSADGVKLGTTKVTSSSSGLTFNSDLDLYSYKPIVQAVEEDSTAVYSRIYKDSEDFEVNTTIGKEIVSPIVSYTPTENVTLTALKIHLSKDASVLRVSIFQGLREVSTLVETNVSAGQHILQLEDYPDLKANTEYRLAFTGTNKDGTTDFKLVGDSLPYLVISTIPWSGHELASRSWVSDQIKAVAHGTDKFLVERTASPTYYVPADKAFEQRTTFIYSGVENGRFILPDISNPANHPGGSLLLLKNESSTSSPLTVITSAGAGLNTRSVTSASVPFSHVMLFIADISNNIWIMLPLVGGGTGGQTLDTDKVVKNVGTSVSGNQLVITYYDDSSITLDFDPWVDDITKLNTAVASFEKQLKSRTRFYIYKGDNSTPPDFPRGNRGGYYLTFYGLSSVADVTLPTGARDGTILFLDNDSTSYPVSATAGQGETIATQSKITIVPESTAWYVKSGTNWQELYSGYLPASHKKLIDEIKTLISASNTFMRDVGVQGDDPNAGKVECTELEFHKCKVTQDTTVPTKGIVKFEGTTFVNPDGSEITTDKIKLVGMELVDPLDGTPPKLLLHGSGNLPTPHPTSGYGFFSDSATAPDTINLNSLPVFRNGRVSIHKDTADPQYAYILLPPGEGADADRIGELGGLPSYWAKSEKIYNIGGVSRTYTVFRSPYPFKEQDVTLIIYH
Physico‐chemical
properties
protein length:1017 AA
molecular weight: 109891,41530 Da
isoelectric point:5,09138
aromaticity:0,09145
hydropathy:-0,25900

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010102737.1
1 1017
Domain Start End Length (AA) Confidence
N-terminal 1 398 398 0,9711
Central domain 399 612 215 0,1148
C-terminal 613 1017 404 0,1909
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-398
Central
399-612
C-terminal
613-1017

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage Pontus
[NCBI] 		2590874 Uroviricota > Caudoviricetes > Demerecviridae > Thalassavirus > Thalassavirus pontus
Host Vibrio harveyi
[NCBI] 		669 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010102737.1 [NCBI]
Genbank nucleotide accession
NC_055801.1 [NCBI]
CDS location
range 87805 -> 90858
strand +
CDS
ATGGGATTTGGCCCAGCCTATGGTACTGGTAGGGGCGGTGGAGCAGTAGACATCTTTACTAAAAAAGATGGAAACCCTGCCATTTTCGCCAATACTGGTGCTAGAGACACATACTTTACAACAAACCCTGATGAATTAGCTAAAGTAAAATCATCAGGTAATGCAGTAGCAATAGGTACTACTGACCAAGTAACAGCTGCCTACGTATATAAAGGTAGCGCATGGCAAGCAATAGCAACTAACTTCAAAGGTGACAAAGGTGCACCTGGAGCACCTGGTGATGGTATTGACTACAGCCACCTAAAAGATAATCAACTGCCTAAGTGGGACTCGAAAACTAAGATGTTTATTAGTTCCGGTGTACGCTCCCTAGAAGATGGCTCTATCTCCCTAGAACCAGCGTCAATGCACTTAGGCTCTCACACTATTTCTAGCAGTGCTGAGAACGTAACATTCACTAATATTGTTACAAGAAAAACATACTCACCTTTATGGCAAGAGGTAGCGCCAGGAGCTAAGACAGGATATATTAGAGCTCATGGTGAGTACCAAGATGTAATACTAGGGGCTGATGGTTCTGTTGACTTACTGAATCCATCATTTATATACACAGCACCTACAGATGCATCTATATTTGGTGCTACAATAGAATTATCAAGGGATGCTACAAATGTAGAGATACATGTAGAGTTCAATAATGAAGAACTATGGTTAGCTAGGCTCGGTGATCTGTCGGCAGGTGAAAGAAAAATATTATTCAGTAATCCAGCTGATTTCAAGATGGGGAATAATTACAGGGTAATAATTGATAGCTCTGATGGGTCTGAGGTTATTCTAAAAGGTAGTAACTTCAACACACCAAAAGCAACCCTCCATGCAGCGAAATGGGAAGATAGGGTAGTCACTTCTATGAGAGAAGGGGCACTAGAAACCGGTGATGTCCCAGTATGGTCTGAGAAAGAAAATGAGTTTATAAAAAATAGTCTAAGTGTTACTCCTGCGGGGGGCTTGGAAGTAAGCGCAGATGGAGTAAAATTAGGTACTACAAAAGTAACTTCTTCATCATCTGGTCTAACATTTAACTCAGACCTAGACTTATACTCCTATAAACCTATAGTACAAGCTGTAGAAGAAGACTCAACGGCTGTATACTCCAGAATCTATAAAGATTCTGAGGATTTCGAGGTAAATACTACAATAGGTAAGGAGATAGTATCTCCTATAGTATCGTATACTCCAACAGAAAATGTGACACTAACTGCACTAAAAATACATTTATCTAAAGATGCTTCAGTACTTAGAGTGAGCATTTTCCAAGGACTTAGAGAGGTATCAACACTTGTCGAAACTAATGTATCTGCAGGACAGCATATACTCCAGTTAGAGGACTATCCTGACTTAAAAGCAAATACAGAATATAGGTTAGCATTTACAGGTACTAATAAAGATGGTACTACTGATTTTAAATTAGTGGGGGATTCATTACCTTATTTAGTAATAAGTACAATACCTTGGTCTGGGCATGAGTTAGCTAGTAGAAGTTGGGTTTCTGACCAAATCAAGGCCGTGGCTCACGGTACAGATAAGTTCTTAGTGGAAAGAACAGCGTCACCAACATATTATGTACCGGCTGATAAGGCGTTTGAGCAAAGAACCACATTTATCTATTCTGGAGTAGAGAATGGTCGTTTTATTCTACCAGATATTAGTAATCCTGCGAATCACCCAGGTGGATCTCTTCTTTTACTAAAAAATGAGTCTAGTACTAGTAGCCCACTAACTGTAATAACGTCGGCTGGGGCAGGACTAAATACTAGATCTGTAACATCAGCTTCAGTACCCTTTAGTCACGTGATGTTATTTATAGCAGATATAAGTAATAACATTTGGATAATGCTACCTCTAGTAGGTGGTGGAACTGGTGGGCAAACACTAGATACAGATAAGGTGGTAAAAAACGTTGGAACTAGTGTATCTGGTAATCAGTTGGTTATAACTTATTATGATGATTCTAGTATTACATTGGACTTTGACCCTTGGGTTGATGATATAACCAAACTAAACACTGCTGTAGCTTCCTTTGAGAAACAACTGAAATCTAGAACTAGGTTCTATATTTATAAAGGTGATAACTCTACACCACCTGATTTCCCGAGAGGTAATAGGGGTGGTTACTACTTAACTTTCTATGGGTTGAGCTCGGTAGCAGACGTTACCCTACCTACAGGGGCTAGGGATGGTACTATATTATTCTTAGATAACGACTCTACCAGCTACCCTGTTAGCGCTACAGCAGGACAGGGGGAGACTATAGCCACCCAAAGTAAAATTACAATAGTACCAGAGAGCACTGCTTGGTATGTGAAGAGCGGTACAAACTGGCAAGAATTATATTCTGGTTACTTACCAGCCTCGCATAAGAAGCTGATAGATGAAATTAAAACTCTAATCTCAGCAAGTAATACATTCATGCGAGATGTTGGTGTACAGGGCGATGATCCTAACGCTGGTAAAGTAGAATGTACAGAGCTAGAGTTTCACAAGTGTAAGGTAACTCAGGATACCACAGTACCTACTAAAGGTATTGTTAAGTTTGAAGGTACTACGTTTGTAAACCCAGACGGTTCAGAAATAACTACTGATAAAATCAAGCTAGTAGGTATGGAATTAGTGGATCCATTAGACGGAACTCCACCTAAACTATTACTACATGGCAGTGGTAACTTACCTACACCACACCCAACTAGTGGTTATGGTTTCTTTAGTGATTCTGCTACTGCTCCTGATACTATTAACTTAAATAGTCTTCCAGTGTTTAGAAACGGTAGAGTAAGTATCCATAAAGACACAGCGGATCCACAATATGCATATATCTTACTACCACCAGGTGAAGGTGCTGACGCTGATCGAATTGGTGAGCTAGGCGGACTTCCTTCTTACTGGGCTAAGAGTGAGAAAATCTATAATATTGGTGGCGTATCAAGAACATATACAGTGTTCCGTTCTCCTTATCCATTTAAGGAGCAAGATGTAACACTAATAATTTACCATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
1597f3453091ec84796a4fb0513bb24d576d59bc22bfc9b489c11860a4aab154
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6138
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50