Protein

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Genbank accession
CEF89913.1 [GenBank]
Protein name
putative tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,81
Protein sequence
MSMSYKQSAYPNLLMGVSQQVPFERLPGQLSEQINMVSDPVSGLRRRSGIELMAHLLHTDQPWPRPFLYHTNLGGRSIAMLVAQHRGELYLFDERDGRLLMGQPLVHDYLKANDYRQLRAATVADDLFIANLSVKPEADRTDIKGVDPNKAGWLYIKAGQYSKAFSMTIKVKDNATGTTYSHTATYVTPDNASTNPNLAEAPFQTSVGYIAWQLYGKFFGAPEYTLPNSTKKYPKVDPDANAATIAGYLNQRGVQDGYIAFRGDADIHVEVSTDMGNNYGIASGGMSLNATAXLPALLPGVGAPGVGVQFMDGAVMATGSTKAPVYFEWDSANRRWAERAAYGTDWVLKKMPLALRWDEATDTYSLNELEYDRRGSGDEDTNPTFNFVTRGITGMTTFQGRLVLLSQEYVCMSASNNPHRWFKKSAAALNDDDPIEIAAQGSLTEPYEHAVTFNKDLIVFAKKYQAVVPGGGIVTPRTAVISITTQYDLDTRAAPAVTGRSVYFAAERALGFMGLHEMAPSPSTDSHYVAEDVTSHIPSYMPGPAEYIQAAASSGYLVFGTSTADEMICHQYLWQGNEKVQNAFHRWTLRHQIIGAYFTGDNLMVLIQKGQEIALGRMHLNSLPAREGLQYPKYDYWRRIEATVAGELELTKQHWDLIKDASAVYQLQPVAGAYMERTHLGVKRETNTKVFLDVPEAVVGAVYVVGCEFWSKVEFTPPVLRDHNGLPMTSTRAVLHRYNVNFGWTGEFLWRISDTARPNQPWYDTTPLRLFSQQLNAGEPLVDSAVVPLPARVDMATSKFELSCHSPYDMNVRAVEYNFKSNQTYRRV
Physico‐chemical
properties
protein length:828 AA
molecular weight: 92077,90590 Da
isoelectric point:6,11368
aromaticity:0,10762
hydropathy:-0,31947

Domains

Domains [InterPro]
DC_0058
STR
1–828
DC_0058
IPR058003
TTP
3–819
IPR058003
CEF89913.1
1 828
Architecture
STR
STR 1-828
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
CEF89913.1
1 828
Domain Start End Length (AA) Confidence
N-terminal 1 141 141 0,9910
Central domain 142 340 200 0,2429
C-terminal 341 828 487 0,3496
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-141
Central
142-340
C-terminal
341-828

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_PaeP_PAO1_1-15pyo
[NCBI] 		1548908 Uroviricota > Caudoviricetes > Autographivirales > Krylovirinae > Phikmvvirus
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CEF89913.1 [NCBI]
Genbank nucleotide accession
LN610580 [NCBI]
CDS location
range 26401 -> 28887
strand +
CDS
CTGAGTATGAGCTACAAGCAATCCGCGTATCCCAATCTGCTGATGGGTGTGAGCCAGCAGGTGCCCTTCGAGCGCCTGCCGGGCCAGCTCAGCGAGCAGATCAACATGGTATCCGATCCCGTGTCAGGACTTCGGCGGCGCAGCGGTATCGAGCTGATGGCCCACCTGCTGCATACCGACCAGCCCTGGCCGAGGCCGTTCCTCTACCACACGAACCTCGGTGGCCGCAGCATTGCGATGCTGGTGGCGCAGCACCGTGGCGAGCTGTACCTGTTCGACGAGCGGGACGGTCGCCTGCTGATGGGTCAGCCCCTGGTGCATGACTACCTCAAGGCCAACGATTACAGGCAGCTACGGGCCGCCACGGTGGCCGATGACCTGTTCATCGCCAACCTGAGTGTAAAGCCCGAGGCCGACCGCACCGACATCAAGGGCGTAGACCCCAACAAGGCCGGCTGGTTGTACATCAAGGCGGGTCAGTATTCGAAGGCATTCTCTATGACCATCAAGGTCAAGGATAACGCCACGGGCACCACCTACAGCCACACGGCCACTTACGTGACGCCGGACAACGCCAGCACCAACCCCAACCTTGCCGAGGCACCGTTCCAAACGAGCGTGGGCTACATCGCTTGGCAGCTCTACGGTAAGTTCTTCGGGGCGCCGGAGTACACTCTGCCCAACTCGACGAAGAAGTACCCGAAGGTGGACCCGGACGCCAACGCGGCAACCATAGCCGGCTACCTCAACCAACGGGGCGTGCAGGACGGGTACATCGCATTCCGTGGCGACGCCGATATCCACGTTGAAGTGTCCACGGATATGGGCAACAACTACGGCATCGCGTCAGGTGGTATGAGCCTCAATGCTACGGCGGSCCTGCCGGCCTTGCTGCCGGGAGTCGGTGCCCCTGGTGTGGGGGTGCAGTTCATGGACGGCGCTGTCATGGCCACCGGCTCCACCAAGGCCCCGGTATACTTCGAGTGGGATTCCGCTAACCGCCGCTGGGCAGAGCGGGCCGCCTACGGCACCGATTGGGTCCTGAAGAAGATGCCACTGGCCCTGCGCTGGGATGAGGCTACCGACACCTACAGCTTGAACGAGCTGGAGTATGATCGACGTGGCTCCGGCGACGAGGATACGAACCCCACGTTCAACTTCGTCACCCGAGGCATCACCGGCATGACGACCTTCCAGGGTCGCCTCGTCCTCCTGTCGCAGGAGTACGTCTGCATGTCGGCCAGCAACAATCCACACCGCTGGTTCAAGAAGTCGGCAGCCGCGCTGAACGACGACGATCCTATCGAGATCGCGGCCCAAGGGAGCCTGACTGAGCCGTACGAGCACGCGGTCACCTTCAACAAGGACTTGATCGTCTTCGCCAAGAAGTATCAGGCCGTGGTCCCCGGTGGCGGCATTGTAACTCCCCGGACGGCGGTTATCAGCATCACCACGCAGTACGACCTCGATACCAGGGCGGCACCTGCCGTGACTGGCCGCAGTGTGTACTTCGCTGCGGAGCGTGCCCTGGGTTTCATGGGCCTGCATGAGATGGCCCCGTCGCCGTCCACGGACAGCCACTACGTCGCCGAAGACGTTACCAGCCACATCCCGAGCTACATGCCGGGGCCGGCTGAGTACATCCAGGCGGCGGCCTCCAGCGGCTACCTGGTGTTTGGTACCAGCACGGCGGACGAGATGATCTGCCACCAGTACCTCTGGCAGGGCAACGAGAAAGTACAGAACGCGTTTCATCGCTGGACGTTGCGGCACCAGATCATTGGCGCCTACTTCACTGGCGACAACCTGATGGTTCTGATCCAGAAGGGCCAGGAGATCGCCCTGGGCCGTATGCACCTGAACAGCCTGCCAGCCCGTGAGGGTCTGCAATACCCTAAATACGACTACTGGCGGCGTATCGAGGCGACCGTCGCTGGTGAGCTGGAGCTGACCAAGCAGCATTGGGACCTGATCAAGGATGCCTCTGCCGTGTATCAGCTACAGCCCGTGGCCGGCGCCTACATGGAGCGTACCCATCTCGGTGTGAAGCGCGAGACGAATACGAAGGTGTTCCTCGACGTGCCCGAGGCCGTGGTCGGGGCGGTGTATGTGGTCGGCTGTGAGTTCTGGTCGAAGGTGGAGTTCACTCCGCCGGTTCTCCGGGACCACAATGGCCTGCCCATGACCTCGACCCGTGCAGTGCTTCATCGGTACAACGTAAACTTCGGCTGGACCGGCGAGTTCCTGTGGCGCATCAGCGACACGGCTCGACCCAACCAGCCGTGGTACGACACGACGCCCCTTCGGTTGTTCAGCCAGCAACTCAATGCCGGGGAGCCTCTGGTGGATAGCGCTGTGGTGCCGCTGCCGGCACGGGTCGATATGGCCACGTCCAAGTTCGAGCTGAGCTGTCACAGTCCGTACGACATGAACGTTCGGGCTGTCGAGTACAACTTCAAGTCCAACCAAACCTACAGGAGGGTGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
8bc91f6052d15403d1a619c665fe7d3199037d8c2847c0586810a738208b1757
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8793
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50