Protein

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Genbank accession
QDF18886.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MPPLKYVGPPIADNGDVVYRSYPATAKQADPAEQAVRDRIAAGFVGYATQAYVEQRDALLATKAYADGRDALRIPLSRKGVTNGIPVLEASGRVSPSRIYVDSIDQPWVRGLWSPAAYNASSVVASSSEQQLYTCQVTDPGYPYRLVVFGSVDARCDVDTEWPVIRVRVGGPSGQIIGLGLGEANTMEKALWGDMFSRDDVDLGGDWLELYTEGHQGHYYTNGNELVWEFGGSSTEDLLALRSNGYDRHTGTNFQRIVATIGSRAGDSPGGGTPQHLRIYARVNDTATQYVCFQITHDTATCWYRNGGAEAQMPGSVGTSQSTNTPFTMVAGTPENPRTFYLYKGASLIMTVPDSTMATAIGPNNRGWGFGARAGSRLITQNGPPRITSVTVNDEVINHHTIGILPRRVDSMPVLTGPTTLHVSALRSAATGQVTVTPKRPALSVLAVPA
Physico‐chemical
properties
protein length:450 AA
molecular weight: 48370,60350 Da
isoelectric point:6,25578
aromaticity:0,08222
hydropathy:-0,26733

Domains

Domains [InterPro]
DC_2308
STR
6–153
DC_2308 IPR055681
IPR055681
STR
168–395
IPR055681 DC_1394
QDF18886.1
1 450
Architecture
STR
STR
RBD
STR 6-153 | STR 168-397 | RBD 398-450
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QDF18886.1
1 450
Domain Start End Length (AA) Confidence
N-terminal 1 146 146 0,7080
Central domain 147 345 200 0,2436
C-terminal 346 450 104 0,9209
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-146
Central
147-345
C-terminal
346-450

Taxonomy

  Name Taxonomy ID Lineage
Phage Gordonia phage SCentae
[NCBI] 		2571251 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QDF18886.1 [NCBI]
Genbank nucleotide accession
MK977696 [NCBI]
CDS location
range 122227 -> 123579
strand +
CDS
ATGCCTCCGCTGAAGTACGTCGGGCCGCCGATCGCCGACAACGGCGACGTGGTCTACCGCAGCTACCCCGCGACTGCCAAGCAGGCCGACCCGGCCGAGCAGGCGGTGCGCGACCGGATCGCCGCCGGGTTCGTCGGCTACGCCACCCAGGCCTACGTCGAGCAGCGTGACGCTCTGCTGGCCACCAAGGCCTACGCCGACGGCCGCGACGCGCTGCGCATCCCGCTCTCGCGTAAGGGCGTCACCAACGGCATCCCGGTCCTGGAGGCCTCGGGACGCGTCTCGCCCAGCCGGATCTATGTCGACAGCATCGACCAGCCGTGGGTGCGCGGACTGTGGTCCCCGGCCGCCTACAACGCGTCCTCGGTCGTCGCCTCGTCGAGCGAGCAGCAGCTCTACACCTGCCAGGTCACCGATCCTGGCTACCCGTATCGCCTGGTCGTCTTCGGCAGCGTCGACGCCCGCTGCGACGTCGACACCGAGTGGCCGGTCATCCGCGTGCGCGTTGGTGGGCCGTCGGGGCAGATCATCGGGCTCGGGCTCGGCGAGGCCAACACCATGGAGAAGGCCCTGTGGGGCGACATGTTCTCGCGCGACGACGTCGATCTCGGCGGCGACTGGCTGGAGCTGTACACCGAGGGCCACCAGGGGCACTACTACACCAACGGCAACGAGCTGGTGTGGGAGTTCGGCGGCAGCTCGACCGAGGACCTGCTCGCGCTGCGGTCCAACGGCTACGACCGGCACACCGGCACCAACTTCCAGCGCATCGTGGCCACGATCGGATCGCGGGCGGGCGACAGTCCCGGCGGCGGCACCCCGCAGCATCTGCGGATCTACGCCCGGGTCAACGACACCGCGACCCAGTACGTCTGCTTCCAGATCACCCACGACACCGCGACCTGCTGGTACCGCAACGGCGGCGCGGAGGCCCAGATGCCGGGCTCGGTGGGCACCTCCCAGTCGACCAATACGCCCTTCACGATGGTTGCCGGGACGCCGGAGAATCCGCGCACCTTCTACCTGTACAAAGGGGCGTCGCTGATCATGACCGTGCCGGACTCCACCATGGCCACCGCCATCGGGCCGAACAATCGCGGCTGGGGCTTCGGTGCTCGCGCCGGGTCGCGCCTGATCACCCAGAACGGCCCGCCGCGCATCACCTCGGTGACGGTCAACGACGAGGTCATCAACCACCACACCATTGGCATCCTGCCGCGCCGGGTGGACTCGATGCCGGTGCTCACCGGACCCACCACCCTGCACGTCTCGGCGCTGCGCTCGGCGGCGACCGGCCAGGTGACCGTGACCCCCAAGCGCCCGGCGCTCTCGGTCTTGGCGGTGCCCGCGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
97e0f483a959eb3554564906122fc98cd145c25d898c9bc5d9a3a6e763b5aa9a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7726
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50