Protein

View in Explore
Genbank accession
QGZ17688.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,87
TF
Evidence RBPdetect2
Probability 0,89
Protein sequence
MSKIEVDEIDKQSGSTLTLGGSGTAVTLASGATQSGFGRAGTVDWQTSIKTASFTAVSGEGYFVNTTSGAITVTLPASPSAGDIVSIKDYAQTFDTNNCTVGRNSEPIEGKTFNLVLDTEGIAITLIYGDATKGWQSVNSNEVTNTQKFIAATGGTVTTCGDFKIHTFTGPGCFTVTCGGNAQGSNKVSYMVVAGGGGGGSAAGGGGAGGFREGKAPFCAPYTASPIACTSGSNAGLPVLVQSYPITVGGGGAGGAAGSDNAGSDGVNSVFSTITSTGGGGGESYGIGVRSGGSGGGAAPSPGGRTGGAGNTPPVSPPQGNPGGPHTNPSPVANYSGTGGGGATAAGPSVSTPNTAGPGGAGATTSISGSPTAYAGGGGGSTLCSGTAGTGGTGGGADGKNGASAPYVGNNGTANTGGGAGAGTSPCFASPTRGGGGTGGSGVVIIRYKFQ
Physico‐chemical
properties
protein length:451 AA
molecular weight: 42295,36230 Da
isoelectric point:5,70274
aromaticity:0,05987
hydropathy:-0,12395

Domains

Domains [InterPro]
DC_1946
ATT
7–449
DC_1946
IPR036240
STR
53–144
IPR036240 IPR049304
QGZ17688.1
1 451
Architecture
ATT
ATT 7-449 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pelagibacter phage HTVC023P
[NCBI] 		2686455 No lineage information
Host Candidadtus Pelagibacter sp. HTCC1062
[NCBI] 		198252 Pseudomonadota > Alphaproteobacteria > Candidatus Pelagibacterales > Candidatus Pelagibacteraceae > Candidatus Pelagibacter >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QGZ17688.1 [NCBI]
Genbank nucleotide accession
MN698239 [NCBI]
CDS location
range 36241 -> 37596
strand +
CDS
ATGAGTAAAATTGAAGTAGATGAAATAGATAAACAAAGTGGCTCGACCTTAACTCTAGGAGGTTCTGGAACTGCAGTTACACTTGCAAGCGGTGCTACTCAATCTGGTTTTGGTAGAGCAGGAACTGTTGATTGGCAGACATCAATTAAGACAGCTTCATTTACTGCTGTGTCTGGAGAAGGTTATTTTGTTAACACAACAAGTGGAGCCATAACAGTAACACTCCCAGCATCTCCAAGTGCTGGAGACATTGTATCTATTAAAGATTATGCTCAAACATTTGACACAAATAATTGTACTGTAGGCAGAAATAGTGAACCTATTGAAGGTAAAACTTTTAATTTAGTTTTAGATACAGAAGGCATTGCAATAACATTAATATATGGAGATGCAACAAAAGGGTGGCAATCTGTAAATAGTAATGAAGTAACAAACACTCAAAAATTTATAGCTGCTACAGGTGGAACTGTAACTACTTGTGGAGATTTTAAAATTCATACATTTACAGGGCCTGGATGTTTTACAGTTACTTGTGGAGGAAATGCACAAGGATCTAACAAAGTTTCTTATATGGTAGTTGCTGGTGGTGGCGGAGGTGGTTCAGCAGCAGGTGGGGGTGGAGCTGGTGGTTTTAGAGAGGGCAAAGCACCTTTCTGTGCACCTTATACAGCATCTCCTATAGCTTGTACATCTGGCTCTAATGCAGGTTTACCTGTTTTAGTACAATCTTATCCAATTACAGTTGGAGGTGGCGGAGCTGGTGGTGCAGCTGGTTCTGATAATGCAGGAAGTGATGGAGTAAATTCAGTTTTTAGCACAATAACTTCAACAGGCGGAGGTGGTGGAGAATCTTATGGTATAGGAGTAAGAAGTGGTGGTTCAGGTGGCGGTGCAGCACCAAGCCCTGGTGGAAGAACTGGTGGTGCTGGAAATACACCTCCTGTAAGTCCTCCTCAAGGAAATCCTGGTGGACCTCATACTAATCCAAGTCCAGTTGCTAACTATTCTGGAACAGGCGGTGGTGGAGCTACTGCTGCAGGACCAAGTGTAAGTACCCCGAACACAGCAGGTCCAGGTGGAGCTGGTGCAACAACTTCAATATCAGGAAGTCCAACCGCATATGCTGGTGGTGGAGGAGGAAGCACATTATGTTCTGGAACTGCTGGTACAGGTGGAACAGGCGGCGGTGCAGATGGAAAAAATGGAGCTAGTGCTCCATATGTAGGTAATAATGGGACAGCTAATACTGGTGGTGGAGCAGGAGCTGGTACATCTCCTTGTTTTGCATCTCCAACTAGAGGTGGTGGTGGAACAGGCGGTTCAGGTGTAGTAATAATAAGGTATAAATTTCAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d23dec841d856eaf82b7fe9276befb0d2a38fb79ff7be55fccb0a501365132a2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8032
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Novel pelagiphages prevail in the ocean Zhang,Z., Qin,F., Chen,F., Chu,X., Luo,H., Zhang,R., Du,S., Tian,Z. and Zhao,Y. 2019 — GenBank