Protein

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Genbank accession
ALM63690.1 [GenBank]
Protein name
receptor binding protein
RBP type
TSP
Evidence RBPdetect
Probability 0,83
Protein sequence
MMLTGMDYGTIRRKDWSAPVNTALNVQYTNTSIIAGGRYFELVGETIPLKANSVNYIHANIDLTQTTSPVKLSAETLNNSNRTDINNSSGVLKVLIDIRTTNGLGVISSEIPKQITTLDELATKTANIEDLTVKGDIKGWTSVSMQNVVSATLQYKKINGAICLRGSGNWGAFKANSTKVVGSLPPEVRPTDNTQFEMTTQRANNNNKPMELQIDTNGTINVWSYSAGSGNYGGVVGTYFQ
Physico‐chemical
properties
protein length:241 AA
molecular weight: 26119,08860 Da
isoelectric point:8,57167
aromaticity:0,06639
hydropathy:-0,30664

Domains

Domains [InterPro]
SSF141658
STR
1–112
SSF141658 DC_0707
IPR048780
RBD
1–110
IPR048780
G3DSA:2.60.520.10
STR
1–112
G3DSA:2.60.520.10
ALM63690.1
1 241
Architecture
STR
RBD
STR 1-112 | RBD 113-241
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ALM63690.1
1 241
Domain Start End Length (AA) Confidence
N-terminal 1 128 128 0,9774
Central domain 129 230 103 0,0027
C-terminal 231 241 10 0,9977
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-128
Central
129-230
C-terminal
231-241

Taxonomy

  Name Taxonomy ID Lineage
Phage Lactococcus phage 936 group phage Phi17
[NCBI] 		1636561 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Lactococcus lactis
[NCBI] 		1358 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ALM63690.1 [NCBI]
Genbank nucleotide accession
KP793114 [NCBI]
CDS location
range 16406 -> 17131
strand +
CDS
ATGATGTTGACTGGAATGGACTATGGAACAATCAGGCGCAAAGATTGGTCAGCGCCAGTAAACACAGCCCTAAATGTACAATATACCAATACTTCAATTATTGCTGGAGGTAGATATTTTGAACTAGTGGGTGAGACGATACCTCTAAAGGCTAATTCTGTCAATTATATCCATGCAAATATTGACTTAACTCAAACTACTAGTCCTGTAAAGTTATCAGCTGAAACTTTAAACAATAGCAACAGAACCGATATAAATAATAGTTCAGGTGTCCTAAAGGTTTTGATTGATATCAGAACGACTAATGGTTTAGGGGTAATCAGTTCTGAAATACCAAAACAAATAACTACATTGGACGAATTAGCAACAAAGACAGCTAATATTGAAGACTTGACAGTCAAAGGAGATATCAAGGGCTGGACTAGCGTTTCAATGCAAAACGTAGTTAGTGCAACTCTTCAATATAAAAAAATTAACGGTGCCATTTGTTTACGTGGTTCAGGAAACTGGGGTGCCTTTAAAGCAAATTCTACAAAAGTTGTCGGAAGTTTGCCACCAGAAGTAAGACCAACTGATAACACTCAATTTGAAATGACAACACAACGTGCAAATAACAACAATAAACCAATGGAACTACAAATAGATACTAACGGTACGATAAACGTATGGAGTTACTCTGCTGGTTCAGGTAACTATGGCGGTGTCGTAGGGACATATTTCCAATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
e51073f2ddfe36b2adf3b38798b14a9aba93282cfb32be8b59b52e777118ffa0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7831
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50