Protein

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Genbank accession
XCO40473.1 [GenBank]
Protein name
hinge connector of long tail fiber protein distal connector
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,73
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MADLKAGSTVGGNPIWHAGTFPLVPAGNSLTYRGKKVYTEIDKPQADDNDFVSKSRGGEYAKRVNFVDGLSINASGGSSSFLAGSGDGADYAKVNAKIQTWYGLGFESSYGTAGVTIVFNLRNGDIKTKGNITVDSGRFVIAGQAPTDNAHLTNKKYVDDRINTVSNVANAAVKKAGDTMTGVLRANAGVVIVNKATSGEYAPRLDQVISRGVTIDFGTY
Physico‐chemical
properties
protein length:220 AA
molecular weight: 23095,46410 Da
isoelectric point:9,15420
aromaticity:0,08636
hydropathy:-0,25727

Domains

Domains [InterPro]
DC_0466
STR
1–216
DC_0466
IPR005601
STR
70–182
IPR005601
XCO40473.1
1 220
Architecture
STR
STR 1-216 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XCO40473.1
1 220
Domain Start End Length (AA) Confidence
N-terminal 1 155 155 0,3280
Central domain 156 209 55 0,1287
C-terminal 210 220 10 0,8315
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-155
Central
156-209
C-terminal
210-220

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage phi1_146043
[NCBI] 		3232222 Viruses >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XCO40473.1 [NCBI]
Genbank nucleotide accession
PP889492 [NCBI]
CDS location
range 56940 -> 57602
strand +
CDS
ATGGCCGATTTAAAAGCAGGTTCAACAGTTGGTGGAAATCCTATTTGGCACGCAGGTACTTTTCCTCTTGTGCCGGCAGGAAACTCCCTAACTTATAGAGGTAAAAAGGTTTATACTGAGATAGATAAACCTCAAGCAGATGATAACGACTTCGTGTCCAAATCCCGTGGTGGCGAGTATGCTAAAAGAGTAAATTTTGTAGATGGTTTAAGTATTAACGCTTCAGGAGGTTCATCTTCGTTTTTAGCTGGTTCAGGAGACGGTGCCGACTACGCCAAAGTTAACGCAAAAATACAAACTTGGTATGGTTTAGGATTTGAATCTTCATATGGAACTGCAGGAGTAACTATCGTCTTTAATTTACGCAATGGCGATATTAAAACTAAAGGTAACATTACTGTAGATTCTGGCAGGTTCGTTATAGCAGGTCAAGCACCTACCGATAATGCTCACTTAACAAATAAGAAATATGTTGACGATAGAATAAATACTGTTAGCAACGTAGCTAACGCAGCAGTCAAGAAAGCTGGTGATACCATGACCGGTGTACTTAGGGCTAACGCTGGCGTAGTTATAGTAAATAAAGCAACATCCGGTGAATATGCTCCTAGATTAGATCAGGTTATTTCACGCGGGGTAACAATAGATTTTGGCACATACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
37b67944664111283a1f1735271d2c951a2ab36137d4fa819686a42d2099cd20
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7224
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The complete genome of Klebsiella pneumoniae phages Fang,Q., Luo,H., Feng,Y. and Zong,Z. 2016-02 — GenBank