Protein

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UniProt accession
A0A8S5S4I8 [UniProt]
Protein name
Nucleoid-associated protein
RBP type
TF
Evidence RBPdetect
Probability 0,87
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MEHITNVLVYSNRCEVLDSHIFTIGDKGFPHIRLKFLYMFGAETLQGKQLELKYILPDKSYQVETISVTGKDEVLFPIHYSVFLIGGWTTLKITIVEGTNRITLDDIVIKTKKIELGKKFENKKIEELIQAEIISKTKEIKEEGEKQKEEIKASKEKVLEEIENKRKTLKGDKGEQGIQGERGNQGVKGDRGDKGDRGAGITSITATGDKVTVNYDDNKNTVFTVPTIAGRDGKEMQNLSYSDNKLKITMSDNSSKEVEIKSGLSLKKIFLGEMHIIGSSKDFLDLGTSNWKIIFI
Physico‐chemical
properties
protein length:296 AA
molecular weight: 33294,80920 Da
isoelectric point:7,70176
aromaticity:0,06757
hydropathy:-0,48547

Domains

Domains [InterPro]
DC_2242
ATT
1–165
DC_2242 G3DSA:1.20.5.320
DC_2056
STR
131–281
DC_2056
Coil
Unmapped
137–172
Coil
A0A8S5S4I8
1 296
Architecture
ATT
STR
ATT 1-165 | STR 166-281 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Siphoviridae sp. ctxYv12
[NCBI] 		2827974 Uroviricota > Caudoviricetes >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DAF45731.1 [NCBI]
Genbank nucleotide accession
BK032518 [NCBI]
CDS location
range 1 -> 889
strand -
CDS
ATGGAGCATATAACAAATGTCTTAGTTTATTCAAATCGGTGTGAAGTCTTAGATAGTCATATTTTTACAATTGGAGATAAAGGTTTTCCACATATAAGATTAAAATTTTTATATATGTTTGGAGCAGAAACACTGCAAGGAAAGCAATTAGAACTTAAATATATACTTCCAGATAAAAGTTATCAAGTCGAAACAATATCTGTAACTGGAAAAGATGAAGTATTATTTCCTATCCATTATAGTGTTTTTCTGATTGGTGGCTGGACTACTCTAAAAATAACAATAGTTGAGGGAACAAATAGAATAACTTTAGATGACATAGTTATAAAAACTAAAAAAATTGAATTAGGTAAAAAATTCGAGAATAAAAAAATTGAAGAGTTAATCCAAGCAGAAATTATATCAAAAACAAAGGAAATAAAAGAAGAAGGAGAGAAGCAAAAAGAAGAAATTAAAGCAAGTAAGGAAAAAGTTTTAGAAGAAATAGAAAATAAAAGAAAAACTTTGAAAGGAGATAAAGGAGAACAAGGAATACAAGGGGAAAGAGGAAATCAAGGTGTAAAAGGCGATAGAGGAGATAAAGGAGATAGAGGAGCAGGGATAACATCAATAACAGCCACAGGAGATAAAGTAACAGTTAATTATGATGATAATAAAAATACAGTTTTTACAGTTCCAACAATTGCTGGTAGAGATGGAAAAGAAATGCAAAATTTATCTTATTCTGACAACAAATTAAAGATTACTATGAGTGATAACAGTAGTAAAGAAGTTGAAATCAAAAGTGGTTTAAGTTTAAAAAAAATATTTTTAGGAGAAATGCATATTATTGGGAGTTCAAAAGATTTTTTAGATTTAGGTACTTCTAATTGGAAAATAATTTTTATTA

Genome Context

Genome Context

Tertiary structure

PDB ID
bc5736c33f0b8bf910b964bd20d4ce727ddcbda6e2b4b2b2df250f4fc9b05a42
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7326
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50