Protein

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Genbank accession

XZP49838.1 [GenBank]

Protein name

tail spike protein

RBP type

Evidence GenBank

Probability 1,00

Protein sequence

MAWPLPKVIPAASTPLTTGGISDSAWVAFGDITFRAEADKKFKYSVKLSDFTTLQQLADAAVDSVLIDRDYTFSNNETVNFGGKTLTIDCKAKFIGDGNLVFTQLGKGSIVIAPFMESATTPWVIKPWTDDNQWITDPAAVVATLKQSKTDGYQPTVNDYVKFPGIESLLPGS

Physico‐chemical properties

protein length:	173 AA
molecular weight:	18760,05440 Da
isoelectric point:	4,73357
aromaticity:	0,10983
hydropathy:	-0,05607

Domains

Domains [InterPro]

G3DSA:2.10.10.80
ATT
3–34

G3DSA:2.10.10.80 IPR011050

G3DSA:2.10.10.80
ATT
3–45

G3DSA:2.10.10.80 IPR011050

IPR040775
RBD
5–31

IPR040775 IPR012332

IPR015331
RBD
37–171

IPR015331

XZP49838.1

1 173

Architecture

ATT

STR

ATT 3-45 | STR 46-173

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
G3DSA:2.10.10.80	ATT	G3DSA:2.10.10.80	3	34	Merged direct domain	G3DSA:2.10.10.80	N-terminal	Low	Positional only	383 proteins / 383 hits
G3DSA:2.10.10.80	ATT	G3DSA:2.10.10.80	3	45	Merged direct domain	G3DSA:2.10.10.80	N-terminal	Low	Positional only	383 proteins / 383 hits
IPR040775	RBD	DC_0821	5	31	InterPro cluster	Tail spike TSP1/Gp66, N-terminal domain	Central	High	Text match	1281 proteins / 1285 hits
IPR011050	STR	IPR011050	34	172	Merged direct domain	Pectin lyase fold/virulence factor	Central	Low	Positional only	572 proteins / 572 hits
IPR012332	STR	IPR012332	35	173	Merged direct domain	Autotransporter, pectate lyase C-like domain superfamily	Central	Low	Positional only	199 proteins / 199 hits
IPR015331	RBD	DC_0844	37	171	InterPro cluster	P22 tailspike C-terminal domain	Central	High	Text match	401 proteins / 403 hits
IPR011050	STR	IPR011050	45	172	Merged direct domain	Pectin lyase fold/virulence factor	Central	Low	Positional only	572 proteins / 572 hits

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Salmonella phage GF04 [NCBI]	3458938	Viruses >
Host	Salmonella enteritidis [NCBI]	149539	cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Genbank protein accession

XZP49838.1 [NCBI]

Genbank nucleotide accession

PX241559.1 [NCBI]

CDS location

range 3872 -> 4393
strand +

CDS

ATGGCGTGGCCCCTGCCGAAAGTTATCCCTGCGGCGTCGACACCTCTTACGACAGGCGGCATTTCGGATTCCGCTTGGGTCGCGTTCGGAGATATTACCTTTCGCGCGGAAGCGGATAAGAAATTTAAATACTCCGTTAAGCTGTCCGACTTTACTACGTTACAACAATTGGCGGATGCCGCCGTTGATAGCGTTCTTATTGACCGCGATTACACTTTCAGCAATAACGAGACCGTTAACTTCGGCGGGAAGACCCTGACCATCGACTGTAAAGCGAAGTTTATCGGCGACGGAAACCTGGTATTTACGCAATTAGGTAAAGGTTCCATTGTAATAGCCCCCTTTATGGAGAGTGCTACAACGCCGTGGGTGATTAAACCCTGGACCGACGATAATCAGTGGATAACCGACCCCGCTGCGGTTGTAGCAACACTGAAACAGTCTAAAACAGATGGATACCAGCCGACAGTAAACGATTATGTCAAGTTCCCGGGAATAGAATCACTCCTCCCCGGAAGCTAA

Genome Context

Tertiary structure

PDB ID

8b5e5d2f55d65675b72eca9f8c43c6772a7d86b1a41e7a5b012f3687fbb48829

ColabFold

Source ColabFold

Method ColabFold

Resolution 0,8591

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence