Protein

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Genbank accession
YP_010669510.1 [GenBank]
Protein name
virion structural protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
Protein sequence
MPANYSKIQSRSGVSIGTVISVPKDSGWSNSTNPTTEGNNWDIEGNFPGWLPCDGRELNKNDYRVLYEVIGDTYGSTSTTFYLPDYRSRKLMGTGPVDGNAPGGLSLTPTITPGNSSTIASPTEAGSEGGVYVIETVRQLPPASEITPSTPSNPPTIGGGATDTFNISTFSSSGFGDVTSIVNSTISGNVSWSAGPVGTFSTPTAPPHYHEVRYAQQGGTSAREGNPYAEAKDVGFMGSTQAGVLSFDRYGGALRTHAHYLNWGYSTEYATYGNDNTYGSSGLVNITDPGGAFATKFGTSFGNDNNRGTTINKTVDVVNDLGVFFNIGNFTLSDAAAQNFDAALGVRLQAAEQMPMMQPYFRLKYIIKAY
Physico‐chemical
properties
protein length:370 AA
molecular weight: 39217,54090 Da
isoelectric point:4,93325
aromaticity:0,10811
hydropathy:-0,38351

Domains

Domains [InterPro]
IPR037053
ATT
6–87
IPR037053 DC_0333
IPR037053
ATT
6–95
IPR037053 DC_0333
IPR011083
ATT
48–89
IPR011083
SSF88874
STR
48–111
SSF88874
YP_010669510.1
1 370
Architecture
ATT
STR
STR
ATT 6-95 | STR 96-111 | STR 115-370
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-H9-1
[NCBI] 		2783674 Uroviricota > Caudoviricetes > Pantevenvirales > Scyllavirus > Scyllavirus aitchnine
Host Synechococcus sp. MW02
[NCBI] 		1620844 Cyanobacteriota > Cyanophyceae > Synechococcales > Synechococcaceae > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010669510.1 [NCBI]
Genbank nucleotide accession
NC_070961 [NCBI]
CDS location
range 17400 -> 18512
strand -
CDS
ATGCCAGCAAATTATTCTAAAATTCAATCAAGATCTGGTGTCAGCATAGGCACCGTAATTAGTGTGCCTAAAGATAGTGGGTGGTCTAATTCTACTAACCCAACAACAGAGGGAAATAATTGGGACATCGAAGGTAATTTTCCTGGATGGTTGCCTTGTGATGGTAGAGAATTGAACAAGAATGATTATCGTGTACTATATGAAGTTATTGGCGATACATATGGTTCAACCTCCACTACATTTTATCTACCAGATTATAGAAGCAGAAAGTTAATGGGAACTGGACCAGTTGATGGTAATGCTCCTGGTGGTTTGTCATTGACACCAACTATTACTCCTGGTAATTCTTCCACAATTGCTTCTCCAACTGAAGCAGGATCTGAAGGTGGCGTATATGTAATTGAAACAGTAAGACAGTTGCCACCAGCATCTGAAATTACCCCATCAACACCATCCAATCCACCAACTATTGGTGGTGGAGCAACTGATACATTTAATATTAGTACATTTTCATCCTCTGGATTTGGAGATGTTACATCTATTGTTAACAGCACTATCTCTGGCAATGTGAGTTGGTCTGCTGGTCCAGTTGGCACATTCTCAACACCAACTGCTCCACCTCACTATCATGAAGTTAGATATGCTCAACAAGGTGGTACAAGTGCAAGAGAAGGTAACCCTTATGCTGAAGCAAAAGATGTTGGTTTTATGGGATCAACTCAAGCTGGTGTTTTATCCTTTGATAGATATGGTGGAGCACTTAGAACTCATGCTCACTATCTAAACTGGGGATATAGTACAGAGTATGCAACATATGGAAATGATAATACATATGGAAGTTCTGGTCTAGTAAATATTACTGATCCTGGTGGAGCGTTTGCTACAAAATTCGGAACAAGTTTTGGTAACGATAATAATAGAGGAACTACAATCAACAAAACAGTTGATGTTGTAAATGATTTGGGAGTTTTCTTTAACATCGGAAACTTCACTCTATCTGATGCTGCTGCACAAAACTTTGATGCTGCGCTTGGAGTTAGACTACAGGCAGCAGAACAAATGCCGATGATGCAACCTTATTTTAGGTTAAAGTACATCATCAAGGCGTACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e3db5f27a5f608bfa47380bf4c4b9630a48bf43b470fcf3983aa031c41d175cd
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4055
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Isolation and Genome Sequence of a Novel Cyanophage S-H9-1 from the Yellow Sea, China Jiang,T. 2019-04-04 — GenBank