Protein

View in Explore
Genbank accession
YP_007011065.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MVNTTWTKHSFSAGELSPRLLQSRKDLSLHAQGVAKSRNLIPLRYGPLVSMPLMQEYRDCRLDPRSNRVFSFSIPDGGYALLVFGDKKLQIVVVRSSTKWSPALFGKTYKTPYTFKDNKSLEYAVFGSTAVFVHKDHPPHHLLYIQDGDKISFTFDEIKFLPPPWLGDGMISGVKSNAKLSISQADTSTARITSDMKIFKPLDKGRSIRLGCHPPEWAKNTNYSIGAYIVADDKVYRSLTTGRSGDRFGYSKGATYVKDNNITWITVLNLSSKTSRESASGAVAPYYVWGDIKDVSKDGRSISVAPQSQTLFQAGVSVVSWFMSAWGEQEGYPSHVTFHNNRLLFSGSKGDELSVYLSSFGAFYDFSLDGEYGCYDPTKALTTAVTDFSASTIHWMHPFGEGVLVGCDTSLWLLSISLSKGLSIDFRRVSGSGVYACPPVSVGDCLVFVCGVGRRIKYISGSTEQGFRFNEITQLADHLFNQRILQLVYQEEPHSIVWVVLEPKDNSFPRLLGCRFSAEGEGDFAWHTHMISDKHYVLSAASFPNDNRGGTSLWMLVALSAGEERSFTVRLNLLDDFK
Physico‐chemical
properties
protein length:578 AA
molecular weight: 64331,17970 Da
isoelectric point:8,56039
aromaticity:0,11938
hydropathy:-0,20017

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_007011065.1
1 578
Domain Start End Length (AA) Confidence
N-terminal 1 196 196 0,9043
Central domain 197 395 200 0,0325
C-terminal 396 578 182 0,0411
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-196
Central
197-395
C-terminal
396-578

Taxonomy

  Name Taxonomy ID Lineage
Phage Liberibacter phage SC1
[NCBI] 		941969 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Candidatus Liberibacter asiaticus
[NCBI] 		34021 Bacteria > Proteobacteria > Alphaproteobacteria > Rhizobiales > Rhizobiaceae > Candidatus Liberibacter

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_007011065.1 [NCBI]
Genbank nucleotide accession
NC_019549 [NCBI]
CDS location
range 13900 -> 15636
strand -
CDS
ATGGTTAATACGACGTGGACAAAGCATTCTTTTTCCGCTGGCGAGCTGTCGCCACGTCTTCTTCAGTCCCGTAAAGACTTGTCTCTGCACGCTCAAGGGGTTGCGAAGAGCCGCAATCTTATCCCTTTAAGATATGGACCCCTGGTTTCTATGCCTCTTATGCAAGAGTACAGAGATTGTCGTTTAGATCCAAGATCAAACCGTGTGTTTTCTTTTAGCATCCCAGACGGTGGTTATGCGTTACTGGTTTTTGGGGATAAAAAACTACAGATCGTCGTTGTAAGATCTTCTACGAAGTGGTCTCCGGCTCTTTTCGGGAAAACGTATAAAACCCCCTATACTTTTAAGGATAATAAGAGCTTAGAATATGCGGTTTTTGGATCAACTGCGGTTTTTGTCCATAAGGATCATCCACCCCACCACCTTCTTTACATCCAAGACGGGGATAAAATCTCGTTTACGTTTGATGAGATAAAGTTTCTTCCTCCTCCTTGGCTGGGGGACGGCATGATTTCAGGGGTTAAGTCGAACGCAAAGCTGTCGATATCTCAAGCGGACACCAGTACTGCCCGTATTACATCGGATATGAAGATCTTTAAACCCCTCGATAAGGGAAGGAGTATTCGTTTAGGATGTCATCCGCCAGAGTGGGCTAAGAACACAAATTATTCTATAGGTGCTTATATCGTTGCGGATGATAAAGTCTACCGAAGTCTTACCACGGGTCGATCGGGGGATCGTTTTGGTTATTCAAAAGGAGCAACGTACGTTAAGGACAATAATATAACTTGGATAACCGTCCTCAATCTTTCTTCTAAAACCTCCCGGGAATCGGCTTCAGGGGCTGTAGCTCCGTATTATGTATGGGGGGATATAAAAGACGTTTCGAAAGATGGGCGTTCAATATCCGTAGCTCCTCAGTCGCAGACCCTTTTTCAAGCAGGAGTCTCTGTTGTTTCGTGGTTTATGAGTGCGTGGGGCGAGCAAGAGGGTTATCCGTCACATGTAACGTTTCATAATAATCGATTGCTGTTCTCTGGCAGTAAGGGCGATGAACTTTCGGTTTATTTATCGAGTTTTGGGGCTTTTTACGATTTTTCTCTTGATGGGGAATACGGGTGTTACGATCCTACGAAAGCGTTAACGACAGCGGTTACGGACTTTTCTGCGAGCACCATTCATTGGATGCATCCGTTCGGGGAAGGGGTGTTGGTTGGGTGTGATACATCTTTATGGCTTTTGTCCATCAGCCTTTCTAAGGGATTATCTATTGATTTTCGACGGGTATCGGGATCAGGAGTGTACGCTTGTCCTCCTGTGAGCGTTGGTGATTGTCTGGTCTTTGTTTGTGGGGTGGGGCGACGGATTAAATATATATCAGGGAGCACCGAACAAGGGTTTCGATTCAATGAAATAACGCAACTCGCTGATCATTTGTTCAATCAGCGTATACTGCAGTTGGTGTATCAAGAAGAGCCGCATTCGATCGTTTGGGTGGTGCTGGAACCTAAGGATAACTCTTTTCCTCGCTTGCTAGGTTGCCGATTTTCGGCTGAGGGGGAAGGGGATTTTGCGTGGCATACCCACATGATTAGCGATAAACATTATGTTTTATCCGCCGCCTCTTTTCCGAATGATAATCGTGGGGGAACATCACTTTGGATGTTGGTCGCACTGTCGGCTGGCGAGGAACGTTCCTTCACCGTTCGTTTGAATTTATTGGATGATTTTAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3467dea876e5aafbf8a4a8b0f7c64405d12b853831b15cf893a07a4100fc3d3e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8672
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50