Protein

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Genbank accession
USL86576.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MRIELTDYNSDPSTTIKIYRHYFPFDAEDLPPVLLVLPGNTSSYTDETLILNTMVYYRVSVVHNGNEVVGPLYTTMKRYYTGPQIDKNTPDKILRGDSYIGRYGTLPLNVILSIDEAKKLVPSCTVLEGIDHETIEVEKCSYHGNVLFISNTPIFYGSPEDLYNDGALLSYGDGLGVFSRTFYDSLTTKVEQGKPVTYNNYSFKFRLMTTSEYAELYVKLYPDSPMGLTCDRVIGNCNTHSYKSPVVDIGSQGNKFRTVGLDGVSSDTEWTTKGPLYMVVELMNRGDMAWPSPDVNIIPADPTDRMMFCQSEIINGRAHFFGGVYSHFNSYASATTKHISINLDGSDRQVHADMPVGVYNACTWVNGNKIYCMGGAKKIGSSEYTYAELYNDIQVWEDDGTPEGSWSTITNSLQFYYGASVTKYYDKITDRQRLLYIGGYGNVIPSGQYNFATADLDTFDGTFTVYNRSNFYDGGGGPIAPHEDYFLWVAPERSTNGFTNATYKLTIPEDTDSYTYRTKITQQGTELPTTKGGKIHIWRDTIFMYGSASLDEKQGELYLYQFVPNENRWLKITVAIPGLSNSSRASLNGAFYEDKLVLMHNQPWLNESFTSSFYVIRLIDPIDAPIIPVTDVQVGTSRIFTTYAEVSI
Physico‐chemical
properties
protein length:648 AA
molecular weight: 72862,78750 Da
isoelectric point:4,95530
aromaticity:0,12963
hydropathy:-0,32747

Domains

Domains [InterPro]
DC_1242
ATT
1–212
DC_1242 IPR015915
IPR015915
STR
299–599
IPR015915
DC_2226
RBD
563–648
DC_2226
USL86576.1
1 648
Architecture
ATT
STR
RBD
ATT 1-212 | STR 280-620 | RBD 621-648
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
USL86576.1
1 648
Domain Start End Length (AA) Confidence
N-terminal 1 70 70 0,9708
Central domain 71 324 255 0,7528
C-terminal 325 648 323 0,5072
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-70
Central
71-324
C-terminal
325-648

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage OMKO1
[NCBI] 		2734642 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa PAO1
[NCBI] 		208964 Bacteria > Proteobacteria > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
USL86576.1 [NCBI]
Genbank nucleotide accession
ON631220 [NCBI]
CDS location
range 54673 -> 56619
strand -
CDS
ATGAGAATTGAATTAACTGACTATAATTCAGATCCATCCACTACTATAAAGATATATCGGCATTATTTCCCATTTGATGCAGAAGATTTGCCGCCCGTACTACTTGTATTACCTGGTAATACAAGTAGCTACACCGATGAGACCCTCATACTCAACACCATGGTTTATTATAGGGTATCAGTTGTACATAATGGCAATGAAGTAGTTGGTCCTTTATACACAACAATGAAACGTTATTATACTGGACCACAGATTGATAAGAATACCCCAGATAAAATCTTACGTGGTGATAGTTATATTGGTCGATATGGTACATTACCTTTGAACGTCATATTGTCAATAGATGAAGCTAAAAAATTAGTACCATCATGTACTGTACTTGAAGGAATCGATCATGAAACAATAGAGGTCGAGAAGTGTAGTTATCATGGGAATGTGTTATTTATTTCTAATACACCTATTTTCTATGGTAGTCCTGAAGATCTTTATAATGATGGTGCTCTACTATCATACGGAGACGGATTAGGTGTATTCAGCCGCACATTTTACGATTCTTTAACAACTAAAGTTGAGCAAGGGAAACCTGTAACGTATAACAATTATTCATTTAAGTTCAGACTGATGACAACAAGCGAGTATGCTGAACTATATGTTAAGTTATATCCAGATTCCCCTATGGGTCTTACATGTGATCGAGTTATAGGTAATTGTAACACGCATTCATATAAATCACCAGTCGTAGATATCGGATCACAGGGTAATAAATTCAGAACAGTTGGATTAGATGGAGTGTCTTCAGACACAGAGTGGACTACTAAGGGACCACTTTATATGGTGGTCGAGTTAATGAATAGAGGTGATATGGCATGGCCAAGCCCTGATGTAAATATCATTCCTGCTGATCCAACTGATCGCATGATGTTCTGTCAATCTGAAATTATTAACGGACGTGCCCATTTCTTTGGTGGTGTTTATAGCCATTTTAATTCATATGCATCGGCCACTACTAAACATATCAGTATTAATTTGGATGGATCTGATAGGCAAGTACATGCGGATATGCCAGTTGGGGTATATAACGCATGTACTTGGGTTAACGGGAATAAAATCTACTGTATGGGCGGCGCCAAAAAGATAGGCAGTAGCGAATATACGTATGCTGAATTATACAATGACATTCAGGTATGGGAGGATGATGGTACGCCAGAAGGTTCTTGGTCAACTATAACGAATAGTTTACAATTTTATTATGGTGCTAGTGTTACGAAGTATTATGATAAAATCACTGATCGTCAAAGACTTTTATATATTGGCGGGTATGGTAATGTAATTCCTTCCGGACAGTATAATTTTGCAACAGCGGATCTGGATACATTTGACGGTACATTTACAGTCTATAATCGGTCTAATTTCTACGACGGTGGCGGCGGTCCAATAGCACCACATGAAGATTATTTCTTATGGGTTGCTCCAGAAAGAAGTACTAATGGTTTTACAAATGCGACATATAAATTAACTATACCTGAAGACACTGACTCGTATACATATAGAACCAAGATAACTCAACAAGGTACAGAATTACCAACCACCAAAGGTGGTAAAATTCATATTTGGCGAGATACTATCTTCATGTATGGCTCGGCATCTCTTGATGAGAAACAAGGTGAGTTATACTTATATCAATTTGTACCTAATGAAAACCGCTGGTTGAAAATAACCGTAGCGATACCAGGATTAAGTAATAGCAGTAGAGCATCTTTAAATGGAGCGTTTTACGAAGATAAGCTCGTGCTTATGCATAATCAACCTTGGCTTAATGAATCGTTTACATCAAGTTTCTATGTTATTCGATTAATCGATCCAATCGATGCACCAATCATCCCAGTCACAGATGTACAAGTTGGCACAAGTCGGATATTTACAACTTATGCTGAGGTTTCGATATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
09d337fcdf6545fe2dbcd707b614bc6b89a935e745c332941e998bc4c4ef505f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7093
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Decay and damage of therapeutic phage OMKO1 by environmental stressors Blazanin,M., Lam,W.T., Vasen,E., Chan,B.K. and Turner,P.E. 2022 35196336 GenBank