Protein

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Genbank accession
QIG70373.1 [GenBank]
Protein name
PAAR repeat-containing protein
RBP type
TSP
Evidence DepoScope
Probability 0,94
Protein sequence
MPGVAYRASISSGACGHPPSGPSSWSGDVFANSQNVVRQGDTFEVHPDLFHPGRAVASGSSTVFANSRQLARISDPINCGDTIATGSSDVIAGG
Physico‐chemical
properties
protein length:94 AA
molecular weight: 9517,28550 Da
isoelectric point:5,75241
aromaticity:0,06383
hydropathy:-0,15213

Domains

Domains [InterPro]
cd14737
STR
2–93
cd14737
G3DSA:2.60.200.60
STR
2–92
G3DSA:2.60.200.60
IPR008727
STR
26–84
IPR008727
QIG70373.1
1 94
Architecture
STR
STR 2-93 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QIG70373.1
1 94
Domain Start End Length (AA) Confidence
N-terminal 1 30 30 0,3072
Central domain 31 83 54 0,1754
C-terminal 84 94 10 0,3440
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-30
Central
31-83
C-terminal
84-94

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RHph_N28_1
[NCBI] 		2509583 No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIG70373.1 [NCBI]
Genbank nucleotide accession
MN988515 [NCBI]
CDS location
range 182434 -> 182718
strand +
CDS
ATGCCGGGTGTAGCTTATCGAGCTTCTATCTCTAGCGGTGCTTGCGGGCATCCGCCATCTGGTCCTAGTTCATGGTCTGGCGACGTGTTCGCAAATAGTCAGAACGTGGTAAGACAAGGTGATACGTTCGAAGTGCATCCGGACCTTTTTCATCCCGGTCGCGCAGTTGCATCGGGCAGTTCTACCGTCTTCGCAAACAGTAGGCAGTTGGCGCGTATCAGCGATCCAATCAATTGCGGTGATACCATCGCGACCGGATCGTCTGACGTAATTGCCGGAGGATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
9aaff12086f85017f7f7b1c415cf635fa450f64174f9c39d6df5bb8504784de9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8955
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Patterns of diversity and host range of bacteriophage communities associated with bean-nodulatin bacteria Vann Cauwenberghe,J., Santamaria,R.I., Bustos,P., Juarez,S. and Gonzalez,V. 1998-01 — GenBank