Protein

View in Explore
Genbank accession
ATN93124.1 [GenBank]
Protein name
short tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,91
Protein sequence
MQNNTLKHISDESKYVTFDPTNSGFNENITNVQDALSAISVDGISGVPQATETVAGKARIATQLEVDAGVSADTFITPATLSYRMQRPEASTTVLGVTQYATDEEAIAGTATNRTIVASSLKATIDNVFTVRTSTETSNGVLKISSTPAAQAGVDDTTAMTPLKTKQAIAAATALIPAWGPATESEQGVVRLATLSQLRDPNIRDGYSVSPFTLNQWQSTESNLGAIKLATSGHMDGGSDHTTAVTPYRFASTRATTGRAGTTILSNDLNGDGSKALSANSAVLPSNRAAVSAGVYEHDTAADNKYMTRNNLKAYLPVGTMTLAAYNYDTGNCLKCNGRWLNKHQWPELFAVIGFTYGGDWGDNFAIPDMRGLVPRGFDDGRGLDPGRGFGSYQEDTMQQITAGWTMDDQAVTSNYPPSGACEARDYGSVNYDAGSDDRKWRGFRMYFDSARQTRVSHETRQKNLALNYVIVAR
Physico‐chemical
properties
protein length:474 AA
molecular weight: 50852,61730 Da
isoelectric point:5,37358
aromaticity:0,07806
hydropathy:-0,40675

Domains

Domains [InterPro]
DC_0176
STR
1–450
DC_0176
IPR037053
ATT
305–371
IPR037053
SSF88874
STR
309–471
SSF88874
IPR011083
ATT
319–375
IPR011083
ATN93124.1
1 474
Architecture
STR
ATT
STR
STR 1-304 | ATT 305-375 | STR 376-471 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage Melville
[NCBI] 		2041413 Uroviricota > Caudoviricetes > Pantevenvirales > Tevenvirinae > Gelderlandvirus
Host Salmonella enterica subsp. enterica serovar Newport
[NCBI] 		108619 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Salmonella

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ATN93124.1 [NCBI]
Genbank nucleotide accession
MF957259.1 [NCBI]
CDS location
range 81809 -> 83233
strand +
CDS
ATGCAAAACAACACTCTAAAACACATATCAGATGAATCCAAATATGTAACATTTGACCCAACTAATAGTGGTTTTAATGAAAATATAACTAATGTGCAGGATGCTTTATCTGCTATTAGCGTTGATGGTATTTCAGGAGTTCCACAAGCTACGGAAACTGTCGCAGGTAAAGCTAGAATTGCAACTCAATTGGAAGTCGACGCTGGTGTTTCTGCGGATACATTTATAACACCAGCAACGTTATCATATAGGATGCAACGTCCAGAAGCGAGTACAACTGTACTTGGTGTAACTCAATATGCGACTGATGAAGAGGCTATAGCTGGAACTGCTACAAACCGCACTATTGTTGCGTCATCGTTGAAGGCCACAATAGATAATGTTTTTACAGTCAGAACATCAACTGAAACTTCCAACGGTGTTTTAAAAATATCATCTACACCAGCTGCTCAAGCCGGTGTAGATGATACTACAGCAATGACACCATTAAAAACCAAACAAGCTATAGCTGCAGCAACTGCTCTTATTCCAGCTTGGGGACCTGCTACTGAATCAGAGCAAGGTGTAGTTCGTTTGGCAACATTGTCTCAATTAAGAGACCCTAATATAAGAGACGGTTATTCAGTGTCTCCATTTACGTTGAATCAGTGGCAATCTACTGAGTCAAATTTAGGTGCTATTAAGCTTGCAACATCAGGTCATATGGATGGAGGTTCTGACCATACAACTGCTGTAACTCCATATCGTTTTGCTTCCACTAGAGCGACAACAGGAAGAGCAGGGACAACTATTTTGTCCAATGATTTGAATGGAGATGGTTCTAAAGCATTATCAGCTAACTCAGCAGTTCTTCCAAGTAATAGGGCAGCGGTATCAGCTGGAGTATATGAACATGATACTGCCGCTGATAACAAGTACATGACACGAAATAATCTTAAAGCTTATTTACCTGTTGGTACTATGACACTTGCTGCTTATAATTACGACACCGGTAATTGCTTGAAATGTAATGGCCGTTGGTTAAACAAGCATCAATGGCCTGAATTATTTGCTGTCATTGGATTTACTTACGGCGGAGATTGGGGAGATAACTTTGCTATTCCTGATATGCGAGGCTTAGTTCCGCGTGGATTTGATGATGGTCGTGGACTGGACCCGGGCCGAGGCTTTGGTAGTTATCAAGAAGACACGATGCAGCAAATAACTGCCGGATGGACAATGGATGACCAAGCAGTAACTTCAAACTATCCTCCTTCGGGAGCCTGTGAAGCTAGAGATTATGGCTCTGTCAACTATGACGCAGGTTCTGATGATAGAAAATGGCGCGGATTTAGAATGTATTTCGACTCAGCTAGACAAACTCGAGTTTCTCATGAAACTCGTCAGAAGAACCTTGCACTTAACTATGTAATTGTAGCTCGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
39cc1b749a8cd04b3473342e899e9a956a7411bbc6274ffdce54e9e25a12e281
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7476
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequence of Salmonella enterica Serovar Newport Myophage Melville Zhang,K., Xie,Y., O'Leary,C.J., Liu,M. and Gill,J.J. 2019 31023797 GenBank