Protein

View in Explore
Genbank accession
CAB53805.1 [GenBank]
Protein name
gp19
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MLNLDKWGNTLFDSNKYQQFNANMEKLEKDSLAKDVDINATNNRIDNVVLEAGGNNITEVVDARTSKNGQVYSTLNSRLNGDYSAIASDLAESNALLQTVNEENKVLKSKLDELYGNSASNIEYYVSSTNGNDVTGTGAIDAPFKTIQKAVNMVPKVKVGGFIYIFCEPGQYNEDVVVQSFSGAECFYIQPTNLATIDPTTGQTGFFVKSILFSGIMFQCVVQGLNSMSTAVNNNSTVIQFARCWYGTVTKCRFDTNLKATNITTVQYNQSRGNCYSNYFKNQNIIMSSEYMGHALFASTNTCEATSNVGLKAASGGILVKSGTPVLNATTAELKQAGGQIF
Physico‐chemical
properties
protein length:342 AA
molecular weight: 37198,21280 Da
isoelectric point:5,21739
aromaticity:0,09357
hydropathy:-0,23304

Domains

Domains [InterPro]
DC_1253
STR
1–337
DC_1253
Coil
Unmapped
90–117
Coil IPR011050
G3DSA:3.30.1910.20
RBD
120–183
G3DSA:3.30.1910.20
CAB53805.1
1 342
Architecture
STR
STR 1-337 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
CAB53805.1
1 342
Domain Start End Length (AA) Confidence
N-terminal 1 153 153 0,9163
Central domain 154 331 179 0,7917
C-terminal 332 342 10 0,9758
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-153
Central
154-331
C-terminal
332-342

Taxonomy

  Name Taxonomy ID Lineage
Phage Listeria phage A118
[NCBI] 		40521 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Listeria monocytogenes
[NCBI] 		1639 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAB53805.1 [NCBI]
Genbank nucleotide accession
AJ242593 [NCBI]
CDS location
range 16781 -> 17809
strand +
CDS
ATGTTAAATCTTGATAAATGGGGAAATACACTTTTTGATTCTAATAAGTATCAGCAGTTTAATGCTAATATGGAAAAATTAGAAAAAGATTCATTAGCAAAAGATGTAGATATAAATGCAACTAATAACAGAATTGATAATGTTGTTTTAGAAGCTGGCGGAAATAATATTACTGAAGTAGTAGATGCTAGAACTAGCAAAAACGGTCAAGTCTACAGCACTTTAAACTCGCGGCTAAATGGTGACTATTCAGCAATTGCAAGTGATTTAGCTGAATCAAATGCGCTACTTCAAACAGTAAACGAAGAAAATAAAGTATTAAAAAGTAAACTAGATGAATTGTACGGTAATTCTGCATCAAATATTGAGTATTATGTTAGTTCAACAAACGGAAATGATGTAACAGGAACAGGAGCTATTGATGCACCATTCAAGACGATTCAAAAAGCTGTAAATATGGTTCCGAAAGTAAAAGTAGGAGGCTTTATTTATATCTTTTGTGAGCCGGGGCAATATAACGAAGATGTAGTAGTACAGTCGTTCAGCGGCGCAGAATGCTTTTATATCCAGCCTACAAATTTAGCAACAATCGACCCAACAACTGGACAAACAGGTTTTTTTGTTAAAAGTATTCTGTTTTCTGGCATCATGTTTCAGTGCGTGGTACAAGGACTTAATTCTATGAGTACGGCAGTGAATAATAATTCTACGGTAATTCAGTTTGCAAGGTGCTGGTACGGCACAGTTACTAAATGCCGATTTGACACTAATTTGAAAGCAACTAATATTACAACTGTGCAATACAATCAATCTCGAGGTAACTGTTATAGCAACTATTTTAAAAATCAAAACATTATTATGTCGTCCGAGTACATGGGACACGCTTTATTTGCATCAACAAATACATGCGAAGCAACTTCGAATGTCGGCTTAAAAGCTGCTAGCGGAGGCATTTTGGTTAAGTCTGGTACGCCAGTTTTAAACGCTACTACCGCAGAATTGAAACAAGCGGGAGGTCAGATATTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
620040d53bae282eac314d88876c796d008a81db6ef750ce182c012c36daa2b8
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8721
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50