Protein

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Genbank accession
ASN73057.1 [GenBank]
Protein name
minor tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,87
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MTVEGVTAAQITELQNHQSALIFVQAAGANNVAPNTAFASILPTTSSVTITGGGDGLDTQLIGYTKATQYFLGAGSSYTFNTLPVSGNVSDLKLTRKISDGTVAVLTYVASGPTGTQWTGAISGGAVAITLGTALNSGEYIRAEDPYAAIATGGQAPSYGSIHGGYDNSIQSGLMNHIVSSAHSHIDDQDGTPGHTMIFGGSAHYITGSIAYSSILGGTGNEIRSGAGNGSVILGGLYSKVSGATAAVLAGERCKVTATYGIASGQSQTVSGTASVALGRGHTVSGANALAIGQGNTVSSDNSIALGNTGTVNSSHAYSALMGGYKARSVMAGNSVNWAYRDSSVGANPLVQDDRIYMGAYFSDQSTHLLPNHVDGVTTDIPVTAGSMTTYQIRVEARGGNIRGGWWTLTAVVQAPAVLAAGTPAVIVAQSVDFSYVDPGLGAGANAVDVSLSINASTGAALNITVKQRVDSAVGTKWSAIVSRAELA
Physico‐chemical
properties
protein length:488 AA
molecular weight: 49182,95390 Da
isoelectric point:5,83341
aromaticity:0,06352
hydropathy:0,11352

Domains

Domains [InterPro]
DC_0261
STR
2–226
DC_0261 IPR011049 DC_0296
IPR011049
STR
195–325
IPR011049
IPR011049
STR
206–322
IPR011049
ASN73057.1
1 488
Architecture
STR
RBD
STR 2-343 | RBD 344-488
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ASN73057.1
1 488
Domain Start End Length (AA) Confidence
N-terminal 1 133 133 0,0503
Central domain 134 332 200 0,7584
C-terminal 333 488 155 0,9815
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-133
Central
134-332
C-terminal
333-488

Taxonomy

  Name Taxonomy ID Lineage
Phage Ralstonia phage DU_RP_II
[NCBI] 		2022331 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Ralstonia solanacearum
[NCBI] 		305 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ASN73057.1 [NCBI]
Genbank nucleotide accession
MF150911 [NCBI]
CDS location
range 23790 -> 25256
strand +
CDS
ATGACGGTTGAGGGCGTCACCGCCGCGCAGATCACGGAGCTGCAAAATCATCAGAGCGCCCTTATTTTTGTGCAGGCGGCTGGCGCGAACAATGTAGCGCCCAACACCGCGTTTGCATCGATCCTTCCAACCACGTCTTCTGTCACGATCACAGGCGGCGGCGATGGATTGGATACGCAACTGATCGGCTACACCAAAGCCACCCAATATTTCCTTGGCGCCGGCAGTTCTTATACGTTCAATACGCTTCCCGTTAGCGGGAATGTGTCTGATCTGAAGTTGACGCGCAAGATTTCTGATGGCACCGTGGCAGTGCTGACTTATGTTGCCAGTGGGCCGACAGGTACGCAATGGACCGGCGCTATTAGTGGTGGCGCTGTGGCCATCACGCTGGGTACGGCCCTGAATAGCGGCGAGTATATCCGAGCGGAAGATCCATACGCAGCTATCGCCACTGGTGGTCAAGCACCTAGCTATGGATCGATCCATGGCGGCTATGACAACAGCATCCAGTCTGGCCTGATGAACCATATTGTATCAAGCGCGCACTCGCACATCGATGATCAAGATGGAACGCCAGGCCATACCATGATTTTCGGTGGATCAGCACACTACATCACCGGCAGTATCGCCTATAGCTCAATTCTGGGTGGAACGGGCAACGAGATACGTAGTGGCGCGGGTAATGGTTCAGTGATTCTGGGGGGGCTGTATAGCAAAGTCTCTGGAGCCACTGCTGCCGTTCTCGCAGGGGAACGCTGCAAGGTCACTGCAACTTATGGCATCGCCTCTGGGCAGAGTCAAACAGTTTCAGGAACCGCTTCTGTGGCGCTCGGCCGTGGGCATACCGTAAGCGGCGCAAACGCGCTCGCTATCGGCCAAGGCAACACGGTGTCGTCAGACAACAGCATTGCCCTGGGAAACACTGGCACTGTCAATTCTTCCCATGCCTATTCCGCGCTTATGGGTGGATATAAGGCGCGTTCGGTAATGGCTGGAAACTCAGTCAACTGGGCCTATCGGGATTCGTCGGTTGGCGCCAATCCTCTGGTCCAAGATGACCGCATATACATGGGGGCATACTTCTCGGACCAATCCACCCATCTCCTACCAAACCATGTCGATGGCGTCACCACTGACATTCCGGTGACGGCCGGTTCGATGACGACGTATCAAATTCGCGTAGAAGCACGCGGTGGCAACATTCGCGGAGGATGGTGGACGCTCACAGCGGTAGTGCAGGCTCCTGCAGTACTGGCTGCTGGCACGCCGGCAGTAATCGTTGCGCAATCTGTCGACTTTTCTTATGTGGATCCAGGTCTCGGCGCTGGCGCCAATGCGGTAGATGTGTCGCTGAGCATAAATGCCAGCACCGGTGCTGCGCTCAATATCACGGTCAAACAACGTGTTGATTCAGCAGTTGGCACGAAATGGTCTGCCATCGTGTCGCGTGCTGAGCTAGCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
37782f8fb90f122aec89377eedeb19f816155790cecaf520195d657498126152
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6873
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation of bacteriophage to control bacterial wilt disease in potato Park,T.-H. 2012-02-28 — GenBank