Protein

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Genbank accession
CAM0108385.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MPLVLDPIQSGYNLSKINDNFQRIEDAWDEKLDRVNSGSFYNQMDQTLDMNSNEIINVKVGDTDDSLVNKGYVDQQDELRVLKAGDSMSGQLNTIDPVQPSNATNKRYVDGMIATIDGVEGIVPLVSPRQQGDGVTTVFPTIVTSQHPTQSYSVNLDGVTQRPQTDFTADTNGNVVFAEAPEVGVDIDITVFEPVNLQEAADLSQVTATGSTTPRTLADRFAGTANVVDFGAVGDGVADDTSAINLASASGKSVVFPKGRYRCTGKLTTSVSWEFLDGASIVIAEPVANMIEIVPEYTKTILGQGDVVIGDFVKYANKLSNLDDYPNHFMVVDSTQLDFNRNHASMQTYTKNSVTLLGENGVLAYPLTTTFNSISRIELSPTNIKRAIFKNLTVELDGAPTTPENMISVTRNCVDFHNTRYVDKTTNSGQIDLQSFVSISYAFDVTFDKITCDALSEGRLDFNYTILTWKSAKIRIKELRSFDGWAQLDGNHTRDVVVRDSTIDRIGGHYAYWDCTFDNITANQSRCIDVSGGGRLDVRNLNIRVNPDFLSGNELYAVAIRGDYAAEWDGDVLVDGVTVDARSIKGELTSETIFNIFSSFADSSSAGFNYGRPTTVAKTVTVRAVRFYCSEDSGAKWVLRACALGYVGAPVSDAQYTESVTVEDVAIVTKDTSFYHQIRALDWFGDVKPATIAQTTSINIKGVNNNDPAFAGQSPSSGLIDQVPTLSILNQDRNSIDVAVSDCNWLKIHSNGHPASPTKIDVVNSRLYYVGGDFDNRMTFNGCNWADTRFEGSWKGTVNSGWFEDYEKSGGGFGNIGFPNNIETNLSGVANVLLGANTTMTTSVHDSYTIYEGTTDGTYWQDTVRPIPNPTFRSGANNPTGVVTPLYLGEEYLDTSPGQFNFYKATGLAISNWKQITA
Physico‐chemical
properties
protein length:918 AA
molecular weight: 100244,90990 Da
isoelectric point:4,57516
aromaticity:0,09368
hydropathy:-0,27222

Domains

Domains [InterPro]
DC_2003
STR
1–543
DC_2003
IPR011050
STR
221–651
IPR011050
IPR012334
STR
225–587
IPR012334
IPR024535
ENZ
226–270
IPR024535 DC_1090
CAM0108385.1
1 918
Architecture
STR
RBD
STR 1-651 | RBD 652-917 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
CAM0108385.1
1 918
Domain Start End Length (AA) Confidence
N-terminal 1 241 241 0,9933
Central domain 242 834 594 0,9645
C-terminal 835 918 83 0,9066
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-241
Central
242-834
C-terminal
835-918

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage PS32B-7
[NCBI] 		3109714 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAM0108385.1 [NCBI]
Genbank nucleotide accession
OZ196897.1 [NCBI]
CDS location
range 43566 -> 46322
strand +
CDS
ATGCCATTAGTATTAGATCCGATTCAATCGGGTTATAACTTGTCAAAGATAAATGACAACTTCCAGCGTATTGAAGATGCGTGGGATGAGAAATTAGATAGAGTGAACTCTGGTAGTTTTTACAACCAGATGGATCAAACGTTAGATATGAACTCTAACGAAATTATTAATGTTAAAGTAGGTGACACTGACGATAGTCTTGTTAATAAAGGTTATGTAGACCAACAAGATGAGTTACGCGTACTGAAAGCTGGTGACAGCATGTCAGGTCAATTAAATACTATTGATCCTGTACAGCCGAGTAACGCAACTAACAAACGCTATGTGGATGGCATGATTGCTACTATTGATGGCGTTGAGGGTATTGTGCCTCTTGTATCTCCGCGTCAACAAGGCGATGGTGTAACAACTGTATTTCCTACTATCGTAACAAGTCAACACCCTACACAGTCTTATTCAGTGAATCTAGACGGTGTTACTCAGCGTCCTCAAACAGATTTCACTGCTGACACTAACGGTAATGTTGTATTCGCTGAAGCTCCTGAAGTAGGCGTGGATATTGACATCACTGTGTTCGAACCTGTTAACCTTCAAGAAGCAGCTGACCTGTCCCAAGTGACAGCTACAGGTTCTACTACTCCGCGTACGCTAGCTGATCGTTTTGCTGGCACAGCTAATGTAGTAGATTTTGGAGCGGTGGGTGATGGAGTCGCTGATGATACTTCAGCAATAAATCTAGCGTCTGCATCTGGGAAATCAGTAGTATTTCCTAAAGGTAGATACCGTTGTACAGGCAAGCTTACAACATCTGTTTCATGGGAATTCCTAGATGGAGCTTCGATTGTTATTGCAGAACCTGTAGCCAATATGATTGAAATCGTTCCTGAGTATACCAAGACAATTTTAGGGCAAGGTGATGTGGTAATCGGAGACTTTGTTAAGTATGCTAACAAGCTTTCTAACCTAGATGACTATCCTAACCATTTTATGGTTGTAGACTCAACGCAGTTAGATTTCAACAGAAACCATGCAAGTATGCAGACTTATACAAAAAACTCTGTAACTCTTTTAGGTGAAAACGGTGTATTGGCATACCCTCTTACAACAACTTTTAATTCTATTTCAAGAATCGAATTATCACCTACAAATATAAAAAGAGCCATCTTTAAAAACTTGACTGTAGAGTTGGACGGTGCCCCAACCACCCCTGAGAATATGATCTCGGTAACACGTAACTGCGTAGACTTCCACAATACGCGATACGTAGACAAAACTACTAACTCAGGTCAAATAGATTTACAGTCATTCGTTTCAATATCTTATGCATTCGATGTCACTTTTGATAAGATAACGTGCGACGCTTTATCAGAAGGAAGGTTGGATTTTAACTATACGATATTGACATGGAAATCAGCTAAGATACGTATAAAGGAGTTACGTTCTTTTGACGGCTGGGCTCAGCTAGACGGCAACCATACTCGTGATGTTGTAGTCAGAGACTCCACTATTGACAGGATAGGCGGACATTATGCGTATTGGGATTGCACCTTCGACAATATAACAGCTAACCAGTCCAGATGTATTGATGTCAGCGGAGGAGGTCGACTAGATGTTCGAAACTTGAATATCAGAGTGAACCCTGATTTCCTTTCAGGGAATGAACTCTATGCTGTAGCTATACGCGGTGACTATGCAGCAGAGTGGGATGGAGATGTACTGGTTGATGGTGTAACAGTAGACGCTCGTTCCATCAAAGGCGAGTTGACTTCAGAGACGATCTTCAATATCTTTTCCAGTTTTGCAGATTCTTCAAGTGCAGGTTTTAACTATGGAAGACCCACTACAGTAGCTAAGACAGTTACAGTACGAGCGGTACGTTTCTACTGTAGCGAAGATTCCGGTGCAAAATGGGTACTTCGCGCCTGTGCGCTAGGCTACGTAGGAGCTCCTGTTTCTGACGCGCAGTATACTGAAAGTGTGACTGTTGAAGACGTAGCTATCGTTACAAAGGATACATCCTTCTACCATCAGATCAGGGCTCTGGATTGGTTTGGCGATGTTAAGCCAGCTACAATTGCACAGACTACCAGTATTAACATCAAAGGTGTTAATAATAACGACCCTGCATTTGCAGGGCAATCTCCTAGTTCTGGATTGATTGACCAAGTACCGACCCTATCTATTCTTAACCAAGATCGTAACAGTATAGATGTGGCAGTGTCCGACTGCAATTGGCTGAAGATCCACTCTAATGGGCATCCTGCTTCACCCACTAAGATAGATGTTGTAAATTCAAGACTGTATTACGTAGGAGGGGATTTTGACAACAGGATGACTTTCAATGGCTGCAACTGGGCAGATACTCGATTTGAAGGTTCTTGGAAAGGTACTGTTAATAGCGGATGGTTCGAAGACTATGAAAAATCTGGAGGAGGTTTCGGCAATATTGGTTTCCCTAACAATATCGAAACGAACCTATCAGGGGTAGCCAATGTACTGCTTGGGGCAAACACCACTATGACTACCAGCGTACACGATTCATATACTATATATGAGGGCACAACCGATGGGACTTATTGGCAGGACACTGTTCGCCCAATTCCTAATCCAACTTTTAGATCAGGAGCTAATAACCCTACAGGGGTAGTGACTCCACTGTACCTTGGGGAAGAGTACCTAGATACTTCCCCTGGTCAGTTTAACTTCTATAAAGCTACAGGTCTCGCAATATCCAATTGGAAACAGATTACAGCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e88a64a280a24873f764af8e91c9871cae7266086196068ee85495e49d3b0c7d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6755
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50