Protein

View in Explore
Genbank accession
QBQ77178.1 [GenBank]
Protein name
putative baseplate wedge tail fiber connector
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence DepoScope
Probability 0,97
Protein sequence
MYIQTPKQLIDVGEIGNASTGDILFDGGVKINNDINAIYNAFGDQRKMATANGTGPNGQIIHATGYYQKGGPTDYFTPVPVGSRHDIDASTGGVIVTVARGELGDSVEFINSNGSISVNNPLSIQALDSIKGVAGNLVITTPYTKVTLRCISSGAGGSIWDYSTESMFSHTEIPVDGTWNIISDYVNIPLFYKTEYNAAKLLVTCQSANGRKIKSCEINILIDTINSRVISTEYAVMRVGNDNEEDEIANISFSIINNFATMTVSSHINGLRVAAKVISTQKIRVAQ
Physico‐chemical
properties
protein length:287 AA
molecular weight: 30811,30440 Da
isoelectric point:5,22330
aromaticity:0,07317
hydropathy:-0,05784

Domains

Domains [InterPro]
IPR036240
STR
1–287
IPR036240
IPR008987
ATT
7–168
IPR008987 IPR027412
G3DSA:1.20.5.960
Unmapped
17–51
G3DSA:1.20.5.960 IPR027411 IPR056391
QBQ77178.1
1 287
Architecture
ATT
STR
ATT 1-267 | STR 268-287
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QBQ77178.1
1 287
Domain Start End Length (AA) Confidence
N-terminal 1 51 51 0,9785
Central domain 52 250 200 0,0211
C-terminal 251 287 36 0,9991
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-51
Central
52-250
C-terminal
251-287

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoM_WFK
[NCBI] 		2508198 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBQ77178.1 [NCBI]
Genbank nucleotide accession
MK373775 [NCBI]
CDS location
range 84221 -> 85084
strand +
CDS
ATGTATATTCAAACTCCAAAACAATTGATTGACGTTGGCGAAATTGGTAACGCTTCTACAGGCGATATCCTTTTTGACGGCGGTGTTAAAATAAACAATGATATAAATGCTATTTACAATGCGTTTGGTGATCAACGAAAAATGGCAACTGCTAATGGGACAGGACCAAATGGACAAATAATCCATGCCACTGGATACTACCAAAAAGGAGGTCCTACTGATTATTTCACCCCTGTTCCAGTAGGAAGTAGACACGACATAGATGCTTCTACCGGTGGTGTTATTGTTACTGTTGCTAGAGGTGAACTCGGCGATTCCGTGGAATTTATAAATTCAAACGGATCAATTTCGGTAAACAACCCATTAAGTATCCAAGCATTAGATTCTATTAAAGGTGTTGCAGGTAATTTAGTTATAACCACACCTTATACTAAAGTTACTCTTCGTTGTATTTCTTCTGGTGCAGGCGGTTCAATATGGGATTATTCTACAGAAAGTATGTTTAGTCATACCGAAATTCCTGTAGACGGGACATGGAATATTATTTCAGACTATGTCAATATTCCTCTATTTTATAAAACTGAATATAATGCTGCTAAACTTTTGGTTACATGCCAATCTGCCAACGGCAGAAAAATTAAATCATGTGAAATAAATATTCTAATAGATACAATTAATTCAAGAGTTATTTCAACCGAATACGCCGTGATGCGCGTTGGTAATGATAACGAAGAAGATGAAATTGCGAATATTAGTTTTTCGATAATTAACAATTTTGCCACTATGACAGTTTCTTCACATATAAATGGTCTTCGAGTGGCAGCTAAAGTTATTTCAACTCAGAAAATTAGGGTCGCTCAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e48ea24e9aba40f6c23353e06df26f66c2922e0744ed52bd5ddbeefd8ecb26bc
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7678
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Still something new to discover - new insights into E. coli phage diversity and taxonomy Korf,I.H.E., Adriaennsens,E., Dreiseikelmann,B., Kropinski,A., Nimtz,M., Meier-Kolthoff,J.P., Rohde,M., van Raaij,M. and Wittmann,J. 2019-05-17 — GenBank