Protein

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Genbank accession
YP_009200196.1 [GenBank]
Protein name
tail protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSNIANTEANATSLDGLVNDNGLITTLRNGPKPSWQYIVDQVYAQLGYAVAGSFVDGFTYTGIRQVGADASGNTWIYTGGEQNLPHVVPAGTVPSAPDYFQVSVNSADNVVLDNGENLQQAIDRLNGEIDSLQEYIDGQQFASVDAVKSYPTLSALIGYSVKTKEYHSGTGYGEATYDVVSAGSVTPNDVNVIQGVADSSAAIVLRDTDSVYAYGVLKNSNSDQLERLQVYADNCHNFNLPSDCAVKISDGLSIPHGRVSIFGRVDPVDGATFTTSELVKIGSYEGVQVGTVTNALEVGFATVFTESTASLSVGDIVTIYNPADFSWSNHRFYYKQGEHLKVSEVIDGTSFKGGNNIFDDYAAGTPLYKLNSKKCSIEALNVHAGDTASYAVTIESLSDGEVNSLTCTGGTIATIHRNRCYNLKFNNPSSLQSYNDGSATNYAHYTLSCQNVVDINPNVRALRHAIALTARNQELSIPNRGCGAIGGVATTFGSAPGVTALDFHGCTEACFYLDMEVNGGVNIGGKNNKVRAKIYQRSHSSCIYGGELVNTNHDYSDCTIITSQAGAQSRGQWIDIGGNAGSLDADVKSGGTLNFRGLVVECLGNPTTSADTIKITNRGYVGDDIKLNFDGMQYVGDSSFDNWVRFLIGRVETGSYINEISIKNAKVNNMALELTANNIYCDGYSSIGAKNLNNKYPAVKLLPVTGIADVGDITVYGASYSGLEVNGALGGDVAVFISSTITCIDCNNTLGSTTEEKSGVAIRQVETAVTPSVIVKGLNVASGANNAIRVNTIDNVVRGEWSFTGYSNTEWSGASIGYDDMSIGLFSLADSAVFSATSLGSVTGRFAVYNQDGVVVGEVPIYDSIT
Physico‐chemical
properties
protein length:866 AA
molecular weight: 91821,44390 Da
isoelectric point:4,65275
aromaticity:0,08661
hydropathy:-0,10635

Domains

Domains [InterPro]
DC_0018
ATT
3–240
DC_0018
Coil
Unmapped
115–135
Coil
YP_009200196.1
1 866
Architecture
ATT
ATT 3-240 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009200196.1
1 866
Domain Start End Length (AA) Confidence
N-terminal 1 224 224 0,9933
Central domain 225 809 586 0,9856
C-terminal 810 866 56 0,8748
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-224
Central
225-809
C-terminal
810-866

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudoalteromonas phage H103
[NCBI] 		1636200 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudoalteromonas marina
[NCBI] 		267375 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Alteromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009200196.1 [NCBI]
Genbank nucleotide accession
NC_028819 [NCBI]
CDS location
range 4118 -> 6718
strand -
CDS
ATGTCTAACATAGCTAATACAGAAGCTAATGCAACGTCCTTGGATGGCTTAGTAAATGATAACGGGCTAATTACAACATTAAGAAATGGGCCAAAACCATCGTGGCAATATATTGTTGATCAAGTTTATGCGCAGCTTGGTTATGCTGTTGCAGGCTCATTTGTTGATGGCTTTACATATACAGGCATTAGGCAAGTTGGTGCGGACGCAAGCGGTAATACGTGGATTTACACAGGCGGCGAGCAAAATTTACCGCATGTAGTACCAGCGGGTACAGTACCTAGTGCGCCTGATTACTTTCAAGTTAGCGTAAATAGCGCTGACAATGTAGTGCTTGATAATGGCGAAAACCTACAGCAAGCTATTGATAGGTTAAACGGTGAGATTGATAGCTTGCAGGAGTACATAGACGGGCAACAATTCGCAAGCGTTGATGCTGTAAAGTCTTACCCCACCCTATCAGCATTAATAGGGTATAGCGTTAAAACCAAGGAGTACCACAGCGGTACAGGCTATGGCGAGGCTACTTATGATGTTGTAAGCGCTGGTAGCGTAACGCCTAATGACGTAAATGTAATTCAAGGGGTTGCTGACTCTAGTGCAGCTATTGTGTTACGTGATACGGACAGCGTTTACGCATACGGAGTATTAAAGAACTCTAACTCAGACCAACTCGAAAGGTTGCAAGTTTACGCTGATAATTGCCATAACTTTAATCTGCCTAGTGATTGCGCTGTCAAAATATCAGACGGTCTATCAATACCTCATGGTCGAGTTTCTATATTTGGACGAGTTGACCCTGTTGACGGTGCCACATTCACAACAAGCGAGTTGGTTAAAATAGGCTCTTACGAAGGTGTGCAAGTGGGTACTGTGACAAATGCGCTTGAGGTTGGGTTTGCCACTGTGTTTACTGAATCAACAGCAAGCTTATCTGTGGGTGATATAGTGACAATATATAACCCCGCTGACTTTAGTTGGTCTAATCATCGCTTTTACTATAAGCAAGGTGAGCATCTCAAGGTAAGCGAAGTAATAGACGGCACATCATTTAAAGGCGGTAACAATATCTTTGACGATTACGCCGCTGGAACGCCCTTATATAAATTAAACTCCAAGAAGTGCAGCATTGAAGCATTAAACGTTCATGCTGGTGATACTGCGTCTTACGCAGTTACAATCGAGTCATTAAGCGACGGTGAGGTTAATAGCCTAACCTGTACTGGCGGCACTATTGCAACCATACACAGAAACAGGTGTTACAACTTAAAGTTTAATAACCCATCAAGCTTACAAAGCTACAATGATGGCTCAGCCACAAACTACGCTCACTATACTCTGTCGTGCCAAAATGTTGTTGACATAAACCCTAACGTAAGGGCTTTACGCCATGCAATAGCGTTAACAGCTAGAAACCAAGAGCTATCAATACCCAACAGGGGTTGTGGAGCTATCGGCGGTGTGGCAACTACATTCGGCTCTGCTCCGGGCGTTACTGCTTTGGATTTTCACGGGTGTACAGAGGCTTGTTTTTACCTTGATATGGAAGTTAATGGCGGCGTGAACATTGGAGGTAAGAACAACAAGGTTAGAGCTAAGATTTATCAGCGCTCACATTCCTCTTGCATATACGGCGGTGAGCTAGTTAACACCAATCACGACTATTCTGATTGCACTATCATAACCTCACAAGCTGGCGCACAGTCTCGCGGTCAGTGGATTGATATTGGTGGTAACGCTGGTTCTCTTGACGCGGATGTAAAATCAGGAGGTACGTTGAACTTCCGAGGCTTGGTTGTAGAGTGTTTGGGAAATCCCACAACATCTGCCGATACAATCAAGATAACAAATCGCGGTTATGTTGGTGATGATATAAAACTTAACTTTGATGGCATGCAGTACGTTGGTGATTCATCATTTGATAACTGGGTTAGGTTTTTAATAGGTAGGGTTGAAACGGGCAGTTATATTAATGAGATATCAATTAAAAACGCCAAGGTTAATAACATGGCGTTGGAGTTAACAGCTAATAACATATACTGCGATGGGTATTCATCAATAGGTGCTAAAAACCTAAACAATAAATATCCAGCGGTTAAGCTGCTCCCTGTTACTGGAATAGCTGACGTCGGTGATATAACCGTATATGGAGCATCTTACAGCGGGTTAGAGGTTAACGGTGCTTTAGGTGGTGATGTTGCAGTATTCATATCATCAACCATTACATGTATTGACTGCAATAACACGCTAGGCAGTACAACTGAGGAAAAATCAGGCGTAGCTATAAGGCAAGTTGAGACAGCCGTTACGCCAAGTGTAATAGTGAAGGGGTTAAATGTCGCCTCTGGCGCTAATAACGCTATAAGGGTAAATACAATTGATAATGTAGTTCGTGGTGAGTGGAGCTTTACGGGGTACTCGAACACCGAATGGAGCGGGGCATCTATAGGTTATGATGATATGTCAATAGGGTTATTTAGTTTAGCGGACTCTGCCGTATTCTCAGCGACATCTCTTGGCTCTGTTACTGGAAGGTTTGCAGTTTACAATCAGGATGGTGTAGTAGTTGGCGAGGTTCCGATATACGACTCAATAACATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
59ff2fa21e31449589142499e010122d310d791c3ca5958bb6af52e7492c1452
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7570
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characteristics and Genome of Marine Bacteriophage H-103 Infecting Pseudoalteromonas marina Sun,M.-Q., Wang,D.-B. and Li,Y. 2015-08-14 — GenBank