Protein

View in Explore
Genbank accession
WYM31040.1 [GenBank]
Protein name
tail fiber protein proximal subunit
RBP type
TSP
Evidence RBPdetect
Probability 0,56
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MVAKSFRATSGLDAAGEKVINVGKASRSVLSDGVNVDFFNEFNTIQQYDSTRGYAAFMAIMYARRIWYARADIPSPAGAFDETKWISTRNDPKWVYNNVTSTDGLPVESGTYLLADGRFSELTYILPDSPVEGDIITIKDGGGLAGLNNLLVRSNTRQIRLRDIQSSSYRLTHPYMTVAFIFNGNLWRVSEMRDNRDSQFVNATGAGSFQLQAGMVTFRNSGTGKITLQLPRYANDGDSITTYDLDRLASVNVATLQVYPGSGHTISYDGINNVTSVTSQRSGYGIFMFDQANSRWVVYDGDQRVRLRRISDDLNMLPNDYVFITPIAGSPPTVRNVTLTLPQDVAEGDRVYISMYMMGKTQNCTIKVKDDSGEKIRTNKNMMQFPQRKDYPPDDWFSVDTLTFNADTDYLPYIELSYLKATKEWVVAQYRPIIERVDPTNRSRLGVIALATQAEVNKNWEDLPSDELAVTPRTLANKTATETRRGIARLATTAEVNQNTTATFLDDVIVTPKKLNERSATEDRRGVLEIATQAETNAGTDDTTAITPKKLDTRRATETLAGIGKLVTTGATTAEGALRGDAGTNVYNFNNGVDLLTPKSLNEKTATEKSKGLVVLATENEVVTGAAAGSASMPIVVTPEMLHRKTSTESRIGLIEIATQDETNTGTDDLRAVTPKKLNDRKATESLDGIIALATTAEVAAGTATNKAVVPVKLKEFFNVTSHVAVATTDGLTQSGTIWTTVNLGIASATETQRGTLRVATQGETDAGTLDNVVITPKKLQAKKATDTAEGIIRCATNSEAAAGTATNLAITPATMQFLNGTDPAWGATTLRRGAVFITTKSNTFIGDNLVGSTQPVDSYLEDFYAVSPRGLNFALQNFLPLNATAQNSLKLGGVVAASWMRRDADQTVTGNNTFNGTSNFVGKVTTNGTLTANAAVTVNNTVTTNNNISQSAKANTVYANTVLSTATAGTKNLLRTFRGGVTDTTWHETVQGTTYRLATGTTDTTDVLTVGDVSNGTMAYSGTTLRLNGKALANTNATGDVTIASDASPTVQLRTDATNGWNGVTISNDNGVTTATVINTRNFTQHLDSTYVNTAGDTMTGALSVSVNGTGGRFTSVSGTAHVQAGDFSGNVQKMRLTGIDDKVLTEFNINITDYNKAMINGNLIYHAGRKPTPAEIGAVAVAGSTVDTLVVRDYIKIGNVKIFANPTTKTCEFVWEE
Physico‐chemical
properties
protein length:1219 AA
molecular weight: 131187,01740 Da
isoelectric point:5,80999
aromaticity:0,06891
hydropathy:-0,27736

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WYM31040.1
1 1219
Domain Start End Length (AA) Confidence
N-terminal 1 354 354 0,7494
Central domain 355 709 356 0,0936
C-terminal 710 1219 509 0,5493
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-354
Central
355-709
C-terminal
710-1219

Taxonomy

  Name Taxonomy ID Lineage
Phage Citrobacter phage Citrof4
[NCBI] 		3136605 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Citrobacter freundii
[NCBI] 		546 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WYM31040.1 [NCBI]
Genbank nucleotide accession
PP554394 [NCBI]
CDS location
range 7861 -> 11520
strand +
CDS
ATGGTAGCTAAATCATTCCGCGCCACAAGTGGCCTTGATGCTGCTGGCGAAAAAGTTATCAACGTTGGTAAAGCATCCCGCTCTGTGTTGAGCGACGGCGTGAACGTTGACTTTTTTAACGAATTTAACACGATCCAACAATACGATTCTACCCGTGGCTATGCTGCGTTTATGGCTATCATGTACGCGCGTCGTATTTGGTACGCTCGCGCAGATATTCCATCACCAGCGGGTGCTTTCGATGAAACAAAATGGATCTCAACCCGTAACGATCCAAAATGGGTATATAACAACGTAACGAGCACTGACGGTCTCCCTGTTGAATCCGGTACGTACTTACTGGCTGATGGTCGTTTCTCTGAACTGACATATATTCTACCAGATTCCCCTGTTGAGGGTGATATTATCACCATTAAAGACGGTGGCGGTCTTGCAGGTCTCAACAACCTTTTGGTTCGTTCAAACACCCGACAGATCCGTTTGCGTGATATTCAGTCAAGCTCTTATCGACTGACTCACCCATACATGACCGTAGCGTTTATCTTTAACGGTAACTTATGGCGTGTTTCTGAAATGCGCGATAACCGCGATTCGCAGTTTGTGAACGCAACAGGTGCGGGTTCTTTCCAACTGCAAGCGGGTATGGTAACATTCCGTAATAGCGGTACAGGCAAGATTACTCTGCAATTGCCTAGATACGCAAACGATGGTGACTCAATCACAACTTACGATCTGGATCGCCTTGCTTCGGTGAACGTTGCGACTCTGCAAGTTTATCCTGGTAGCGGACACACGATCAGCTATGACGGTATCAACAACGTAACTTCTGTGACTTCACAGCGTTCCGGTTATGGTATCTTCATGTTCGATCAGGCTAATAGCCGCTGGGTCGTTTATGATGGTGATCAGCGCGTTCGTCTGCGTCGTATCAGTGATGACCTGAACATGTTGCCGAACGATTACGTGTTTATCACCCCGATCGCTGGTAGTCCTCCAACTGTGCGTAACGTAACGCTGACTCTTCCGCAAGATGTTGCCGAAGGTGATCGCGTGTATATCAGTATGTATATGATGGGGAAAACGCAGAACTGCACAATCAAAGTTAAAGATGATTCCGGTGAAAAGATCCGCACCAACAAAAACATGATGCAGTTCCCACAGCGTAAGGATTATCCACCTGATGACTGGTTCAGTGTTGACACTCTGACTTTCAACGCCGATACTGACTATCTTCCATATATAGAATTGTCGTATCTGAAAGCTACGAAAGAATGGGTAGTTGCACAATATCGCCCGATCATTGAACGTGTTGATCCAACAAACCGTTCTCGTCTGGGTGTGATCGCGCTGGCTACACAGGCAGAAGTAAACAAAAACTGGGAAGATTTGCCTTCTGATGAACTGGCAGTAACCCCGCGTACACTGGCGAATAAAACTGCTACGGAAACACGCCGTGGTATCGCTCGTCTGGCAACAACTGCGGAAGTTAACCAGAACACTACGGCTACTTTTTTGGATGACGTGATCGTGACGCCTAAAAAGCTGAACGAACGATCAGCAACAGAAGATCGTCGTGGGGTGCTGGAAATCGCAACTCAGGCAGAAACAAACGCGGGTACTGATGACACTACCGCAATCACGCCTAAGAAGCTCGACACGCGCCGCGCGACCGAAACCCTAGCAGGTATCGGGAAACTCGTTACAACGGGCGCTACGACAGCGGAGGGGGCTTTACGTGGGGATGCTGGTACTAACGTCTACAACTTCAATAACGGTGTTGACTTACTGACTCCGAAATCATTGAACGAGAAGACGGCGACCGAAAAGTCAAAAGGTCTGGTTGTTCTGGCGACCGAAAACGAAGTGGTAACTGGTGCTGCTGCTGGATCTGCTTCAATGCCGATCGTAGTAACTCCTGAAATGCTCCATCGTAAAACGTCTACTGAATCGCGTATCGGTTTGATTGAGATCGCAACTCAGGACGAAACGAACACAGGAACCGATGATCTCCGTGCGGTGACGCCTAAGAAGCTGAACGATCGCAAGGCTACTGAATCGCTTGATGGTATTATTGCCCTCGCTACCACTGCGGAAGTTGCAGCAGGTACGGCAACGAATAAGGCAGTTGTTCCGGTTAAGCTGAAAGAGTTCTTCAACGTTACGAGTCATGTTGCGGTTGCAACCACTGATGGTTTAACTCAGTCCGGTACTATCTGGACAACGGTTAACCTGGGGATTGCGTCTGCTACTGAAACACAGCGTGGTACTCTGCGCGTAGCGACTCAGGGCGAAACTGATGCGGGTACTCTGGATAACGTGGTCATCACGCCTAAGAAACTGCAAGCGAAGAAAGCGACGGATACCGCCGAAGGTATCATTCGTTGTGCAACCAACAGCGAAGCTGCTGCGGGTACTGCTACTAACCTGGCAATTACTCCGGCTACCATGCAGTTCTTGAACGGTACTGATCCGGCATGGGGTGCTACAACATTGCGCCGTGGTGCGGTGTTTATCACTACCAAATCGAACACGTTCATCGGTGATAATCTGGTTGGTTCTACTCAGCCTGTAGATAGCTATCTGGAAGATTTCTACGCTGTATCGCCTCGCGGTCTGAACTTTGCTCTGCAAAACTTCTTACCGTTGAACGCAACAGCACAGAATAGCCTGAAACTGGGCGGTGTGGTAGCTGCAAGCTGGATGCGTCGTGATGCAGATCAAACCGTAACGGGCAACAACACGTTCAACGGTACAAGCAACTTCGTTGGTAAAGTAACCACTAACGGGACTCTGACGGCTAACGCTGCGGTAACTGTTAACAACACCGTAACCACGAACAATAACATTAGCCAGTCTGCGAAAGCAAACACGGTTTATGCTAATACTGTTTTGAGTACAGCAACCGCTGGAACTAAAAACTTGCTTCGTACTTTCCGTGGCGGTGTGACGGATACTACATGGCATGAAACTGTTCAGGGAACTACGTATCGCTTGGCAACTGGCACAACCGACACGACCGACGTTCTGACTGTTGGTGATGTATCTAACGGTACAATGGCGTACTCCGGTACTACTCTGCGCCTGAATGGTAAAGCACTGGCTAACACGAACGCAACAGGTGATGTGACTATTGCAAGTGATGCAAGTCCTACGGTACAATTACGAACCGATGCAACTAACGGTTGGAACGGCGTAACAATCAGTAATGATAACGGCGTGACTACTGCAACCGTAATCAACACCAGAAACTTTACCCAGCATCTTGACAGTACCTATGTCAATACAGCGGGTGATACTATGACTGGTGCGCTGTCAGTTAGCGTAAACGGCACGGGTGGACGCTTTACCAGTGTGAGCGGTACGGCACATGTTCAGGCGGGTGATTTCTCTGGTAACGTCCAGAAGATGCGCTTAACTGGCATTGACGATAAGGTATTGACTGAATTCAATATCAATATCACCGATTACAACAAAGCGATGATCAACGGAAACCTGATCTATCATGCAGGTCGTAAACCAACTCCGGCAGAAATTGGGGCGGTTGCGGTTGCGGGTTCAACTGTAGATACTCTGGTTGTTCGTGATTACATCAAAATCGGAAACGTAAAAATCTTCGCAAATCCAACAACTAAGACTTGTGAATTTGTGTGGGAGGAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4631df9bce9226300129e9208f2b15d76701915579af264f30c484200c55e6c8
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5687
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50