Protein

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Genbank accession
CEO90822.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MTEQIDNIAIREALKKMFSVGTHSLQFTKKDGTVREMIATRDPALMPFETYEKWLVPNVEKPRKESETSLPVYEIAVEGFRSFGLDSLINVDGLTPAQIVEIYK
Physico‐chemical
properties
protein length:104 AA
molecular weight: 11849,51010 Da
isoelectric point:5,16726
aromaticity:0,08654
hydropathy:-0,27212

Domains

Domains [InterPro]
IPR024401
STR
12–89
IPR024401
CEO90822.1
1 104
Architecture
STR
STR 12-89 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Enterobacteria phage GEC-3S
[NCBI] 		1222338 Uroviricota > Caudoviricetes > Pantevenvirales > Krischvirus > Krischvirus gec3s
Host Escherichia coli O104:H4
[NCBI] 		1038927 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CEO90822.1 [NCBI]
Genbank nucleotide accession
HE978309.1 [NCBI]
CDS location
range 126239 -> 126553
strand -
CDS
ATGACTGAACAAATTGATAATATCGCAATTCGTGAAGCACTAAAGAAAATGTTTTCGGTCGGTACTCACTCTTTGCAGTTTACTAAGAAAGATGGTACTGTCCGCGAGATGATCGCCACGCGAGATCCGGCACTGATGCCGTTTGAAACATACGAAAAGTGGTTAGTTCCTAATGTAGAAAAACCGCGTAAAGAATCAGAAACATCTTTGCCCGTATATGAAATTGCAGTTGAAGGTTTCCGTAGTTTTGGGCTTGATAGTCTGATTAATGTAGACGGGCTGACTCCAGCACAGATCGTCGAAATTTATAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d756da8970a7b66ba6aa60b31e6013365bc4224d9ef029effc23efac9348900d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8683
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Selection and characterization of a candidate therapeutic bacteriophage that lyses the German Escherichia coli O104:H4 outbreak strain Merabishvilli,M., De Vos,D., Verbeken,G., Kropinski,A., Vandenheuvel,D., Lavigne,R., Wattiau,P., Mast,J., Ragimbeau,C., Mossong,J., Scheres,J., Chanishvili,N., Vaneechoutte,M. and Pirnay,J.P. — — GenBank