Protein

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Genbank accession
XYW65835.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,68
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MRGYSFSELVKLAEGALKRSGDTAAGPLTAPNFLLSDAQSQSGNAVVRLDYLAEVTDDLRAVDTLLGKSTRSALKRTYAETGFNLVDGSFESGGVVRKSTDVLLYEAEGKAYSWNGVYASGQKTVPPESTPDTAGGLGSSAWVDMSEVTLVEGIMKPVTWKGYAGGADKTGVNDSTSIFSLAYVAANNDGTMIVTPKGTYKVGATVYEVESNSIWLSREFNIGVSVPREARSSPLLITVGNKDIPELDGKYTRSGINITAKGRGGQHIDCIRTTLLNSSTDGQGNTAVYGHAASDTMAMWTTALHGETRHAGGTTIGVNVEPASFSTTGTFYGVVLNNTTGSFPGNHPITGQQAVAHPTATAMYITGSDMAGEKGQWLRGIRFGALSMRANGTLIRDESSASQGYWSQSSSSKSVADIFLEGTAPQGIILQGEYSTGNAIRIKAGSAVAYESTGFVKTKYSSVDGQWGLFNGAVPRATFRTDGFGMLINGVQVVGERQGYIPNATVGTEVAVINSILAALGNHGLISKTA
Physico‐chemical
properties
protein length:530 AA
molecular weight: 55571,35030 Da
isoelectric point:6,03865
aromaticity:0,07925
hydropathy:-0,15774

Domains

Domains [InterPro]
DC_0018
ATT
3–236
DC_0018 DC_2072
G3DSA:2.10.10.80
ATT
83–155
G3DSA:2.10.10.80 DC_2072
IPR040775
RBD
89–146
IPR040775
XYW65835.1
1 530
Architecture
ATT
STR
ATT 3-236 | STR 265-528 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XYW65835.1
1 530
Domain Start End Length (AA) Confidence
N-terminal 1 176 176 0,9932
Central domain 177 394 219 0,8793
C-terminal 395 530 135 0,9084
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-176
Central
177-394
C-terminal
395-530

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage AS3
[NCBI] 		3448185 Viruses > unclassified bacterial viruses >
Host Aeromonas salmonicida
[NCBI] 		645 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYW65835.1 [NCBI]
Genbank nucleotide accession
PV831791.1 [NCBI]
CDS location
range 52508 -> 54100
strand -
CDS
ATGCGTGGATATTCATTCAGTGAGTTAGTAAAACTAGCAGAAGGCGCCCTAAAAAGGAGCGGAGACACCGCGGCAGGACCATTGACGGCTCCAAATTTCTTGCTATCGGACGCGCAAAGCCAGAGCGGGAATGCGGTAGTACGACTTGATTACCTAGCAGAGGTCACGGACGACTTAAGGGCAGTGGACACACTGTTAGGTAAGAGCACAAGATCTGCGCTGAAACGAACATATGCGGAAACCGGGTTTAACCTTGTTGACGGAAGCTTCGAAAGCGGTGGAGTTGTACGTAAGAGTACAGACGTGCTACTATACGAGGCTGAAGGAAAAGCATATAGCTGGAACGGTGTTTATGCTAGCGGCCAAAAGACAGTGCCACCGGAATCAACACCTGACACAGCAGGTGGGCTGGGCTCAAGCGCTTGGGTTGACATGTCGGAAGTTACACTGGTAGAAGGTATCATGAAGCCAGTGACCTGGAAGGGGTACGCAGGCGGTGCTGACAAAACAGGTGTAAATGACTCAACATCAATATTCAGCCTTGCCTACGTAGCCGCAAACAACGACGGAACTATGATAGTTACCCCAAAGGGGACATACAAAGTCGGGGCTACAGTATACGAAGTCGAGTCCAACTCAATCTGGTTAAGCCGGGAGTTCAATATAGGCGTGAGCGTGCCTAGAGAGGCACGTAGTTCCCCACTGCTAATAACGGTAGGGAACAAAGACATACCGGAGCTAGACGGCAAGTATACTCGGTCTGGCATAAACATAACTGCAAAAGGTCGTGGTGGCCAGCATATAGATTGTATCAGAACAACACTGTTAAACTCGTCCACTGACGGCCAAGGCAACACAGCAGTATACGGTCATGCAGCATCTGATACGATGGCCATGTGGACAACTGCATTGCACGGCGAAACAAGGCATGCTGGTGGTACGACAATTGGTGTAAACGTAGAGCCAGCGAGCTTTAGTACCACTGGAACATTCTACGGTGTAGTGCTGAACAACACAACTGGGTCATTCCCAGGTAACCACCCAATAACAGGGCAACAAGCGGTAGCCCACCCAACAGCAACTGCAATGTACATCACCGGCAGTGACATGGCTGGGGAAAAGGGCCAATGGCTCCGAGGGATTAGATTCGGAGCTTTGTCCATGCGAGCTAACGGGACACTGATACGTGATGAGTCATCAGCATCGCAAGGGTACTGGTCGCAGAGCTCCTCAAGTAAGTCTGTAGCGGATATATTCCTAGAGGGGACAGCGCCACAAGGCATCATCTTGCAGGGTGAGTACTCCACAGGCAACGCTATACGGATAAAAGCCGGAAGCGCAGTTGCGTATGAGTCTACAGGGTTTGTCAAGACTAAATACTCTAGCGTTGATGGTCAGTGGGGCCTATTTAACGGGGCTGTGCCAAGGGCAACGTTCCGCACAGACGGTTTCGGGATGCTCATAAACGGTGTACAGGTAGTGGGTGAGAGGCAAGGTTACATACCGAACGCCACTGTAGGCACTGAGGTAGCGGTGATCAACTCAATACTTGCGGCACTAGGCAATCACGGGCTGATCAGCAAAACGGCGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
f51129646279fee160014a45ee4353fccf8044951c3c306fe67d073d2f575e72
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,6231
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50