Protein

View in Explore
Genbank accession
QIG75065.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MSIISKLTNGVTSRAAFASSFNALVNKANILYTFDATVTAASLAHLTAVAIGDTYQTRYFDSALEEGSAAIWRAVDASNLGPAGNISYRTVFGGAIAGNPSALSTLASVGIVAGDTFVVNGNTLTVMASGASGNNQINLASRLQDLLAKIVTLMSTPLGDRCTMEFYSTGKISIQSSDINNIVTTDLVLSGTIPAKIGFANQTYVFPTGICLEGVSTRWQLVAGSGSEVDIRALGNKCDGVTVASRRNFTSTIYGAAALGYVLVNQKGIRSDFVGAVRINRTYDFRRCACDLAILAGTPVTATTAAGHGDFFNEAAHIQYLADIATWQAAGSNPDTKPSDPNNGITVYSYTDFAGTTRYAGIAVMGSGNASDALFLRQKFNIRGDGNFDFTTTSTVVAVLLSDDNSSAGEYEAEVSYCQIGVVIKDNQEKNRVKVSGQYCDLVVYADSTSSNSPDTMFVDIHAQTCKHWFWEEDGSDTSIHWNLHVESRVDPDPATASPPFWIRNGKVSILSGQMRANNGRSLGLIDKAANGAADTMVFKDFTVIHGYGTMEIRRVRHLMGSLKMKNTNDGPDSGGSVQGPALHLKRVGDAGGFRAHISGCDNREAVRIGDASTTFHANGLYGIDCDYGEYTLQMGSTIFPFNADGSEAAAGFPTTQKALVIEKMKGGSVRLAQCAGNIDVLADVVATVTGNPIVYAPRTFKRYTATKATAAVCDFICPAGDTITVTAT
Physico‐chemical
properties
protein length:729 AA
molecular weight: 77125,62060 Da
isoelectric point:5,77788
aromaticity:0,08368
hydropathy:-0,01605

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QIG75065.1
1 729
Domain Start End Length (AA) Confidence
N-terminal 1 123 123 0,6386
Central domain 124 673 551 0,8414
C-terminal 674 729 55 0,9119
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-123
Central
124-673
C-terminal
674-729

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RHph_N2_6
[NCBI] 		2509744 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIG75065.1 [NCBI]
Genbank nucleotide accession
MN988543 [NCBI]
CDS location
range 1210 -> 3399
strand +
CDS
ATGTCCATCATTTCGAAACTGACGAATGGCGTCACCAGCCGCGCCGCCTTCGCATCCTCCTTCAACGCCCTGGTGAACAAGGCGAATATTCTTTACACCTTTGATGCTACTGTGACAGCGGCAAGCCTCGCCCATCTTACAGCAGTGGCAATCGGGGATACCTACCAGACCCGATATTTCGATAGTGCCTTGGAGGAGGGCTCGGCAGCGATCTGGCGGGCGGTCGACGCCAGCAATCTAGGACCGGCCGGTAACATTTCCTACCGCACTGTTTTTGGTGGGGCCATCGCCGGGAATCCGTCCGCGCTCTCCACACTAGCATCCGTGGGGATTGTTGCCGGCGACACCTTCGTTGTCAACGGCAATACCTTGACCGTAATGGCATCGGGCGCCAGCGGCAACAACCAGATCAATCTTGCCTCTAGGCTTCAAGACCTGCTTGCGAAAATCGTCACGCTGATGTCGACGCCTCTGGGTGATCGTTGCACGATGGAGTTCTACAGCACCGGCAAGATCAGCATTCAGTCGAGCGATATCAACAATATCGTCACAACGGATCTTGTGCTTAGCGGCACCATCCCCGCAAAGATCGGCTTCGCCAACCAGACCTATGTGTTTCCGACCGGCATCTGCCTCGAGGGCGTCTCGACGCGTTGGCAACTGGTTGCTGGGTCGGGCAGCGAGGTGGACATCAGGGCGCTTGGTAATAAGTGCGACGGTGTAACAGTCGCCAGCCGGCGCAATTTCACGTCCACCATCTACGGCGCGGCGGCGCTCGGCTATGTGCTGGTTAACCAGAAGGGCATCCGGTCTGACTTTGTCGGCGCGGTCAGGATCAACCGGACCTATGATTTCAGGCGCTGCGCTTGCGACCTGGCTATCTTGGCCGGCACACCTGTCACGGCGACGACTGCAGCGGGTCATGGCGATTTCTTCAATGAGGCCGCGCATATCCAGTATCTAGCCGATATCGCCACATGGCAGGCTGCGGGGTCTAATCCAGATACCAAGCCATCCGACCCCAACAATGGAATTACCGTCTATAGCTATACCGACTTCGCTGGAACGACGCGCTATGCCGGCATAGCGGTCATGGGGTCGGGCAATGCATCTGACGCCCTGTTCCTTCGCCAAAAGTTCAATATTCGCGGTGACGGCAATTTCGACTTCACGACGACCTCGACGGTCGTGGCTGTCTTGCTTTCTGACGACAACAGCTCGGCCGGTGAATACGAGGCGGAAGTCTCCTATTGCCAGATTGGAGTCGTCATCAAGGACAATCAGGAGAAGAACCGCGTCAAGGTGAGCGGGCAGTATTGCGATCTAGTGGTTTATGCCGACAGCACATCGTCCAACTCTCCCGACACTATGTTCGTGGATATCCACGCCCAGACGTGCAAACACTGGTTCTGGGAAGAGGACGGATCGGACACGTCAATTCATTGGAACCTGCACGTCGAGAGCCGGGTCGACCCTGACCCCGCCACCGCGTCACCGCCCTTCTGGATCAGGAACGGCAAGGTCTCTATTCTCTCGGGCCAGATGCGCGCAAACAACGGCAGGTCTCTAGGGCTCATCGACAAGGCAGCCAACGGTGCGGCCGATACGATGGTGTTTAAGGATTTCACGGTCATCCACGGCTACGGCACGATGGAGATCCGAAGAGTCCGGCACCTCATGGGCAGCCTGAAAATGAAGAATACGAACGATGGCCCGGATAGCGGTGGTTCGGTTCAAGGTCCGGCTCTTCACTTGAAGAGGGTCGGAGACGCTGGTGGGTTCCGAGCTCACATCAGCGGTTGTGACAACCGCGAAGCCGTCCGTATCGGCGACGCCTCGACCACATTTCATGCCAATGGTCTCTACGGCATTGACTGTGACTACGGCGAATATACGCTGCAGATGGGGTCCACTATTTTCCCCTTCAATGCTGACGGCAGTGAAGCTGCTGCCGGGTTCCCGACCACGCAGAAAGCCCTTGTCATCGAAAAGATGAAAGGCGGCTCGGTCAGGCTGGCGCAGTGTGCGGGCAACATCGACGTTCTCGCTGATGTAGTGGCGACGGTCACCGGCAATCCGATTGTCTACGCGCCTCGGACATTCAAGCGCTATACGGCGACCAAGGCGACAGCCGCGGTATGTGACTTCATCTGCCCGGCAGGCGACACCATCACTGTTACAGCCACCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ca3fa4adeb6f3343fdb4f4194ffecec9bc5d178c0da7271f3716840f6d2f2cc4
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5319
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Patterns of diversity and host range of bacteriophage communities associated with bean-nodulatin bacteria Vann Cauwenberghe,J., Santamaria,R.I., Bustos,P., Juarez,S. and Gonzalez,V. 1998-01 — GenBank