Protein

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UniProt accession
A0A8S5QKC4 [UniProt]
Protein name
Nucleoid-associated protein
RBP type
TSP
Evidence RBPdetect
Probability 0,86
TF
Evidence RBPdetect2
Probability 0,56
Protein sequence
MIMETNELILKLDKETTIPLIEGLGKSAYAIAVAHGFRGTEQEWLDSLKGLQGPQGEPGPKGAPFQYEDFTPDQLEALKGPKGDKGEDGRDGASASADNAHQLLLQGNVWCESAEIDDVLTALIGNMGKPFPRTEFKPLTIPSVIQGQQVVAVTGEPHYSVKVLGNDTPFTLDSTGACSVNIPPLGEDDIKLTYHNFTGAKVGETVIAGIHKDNRTPDETYEENGVKYALFGRNLEINAVNFNGDFEHNFKFLGKWQVSAIDNILIQARRPTVLKIGAWYGRNYSVNDVSDNPIGNIPILVDNPKNLTFENNEKSGLFVKLGSVEFGTSDVQFTTSQIEWSDSQHKYVNTGDSVDHL
Physico‐chemical
properties
protein length:357 AA
molecular weight: 39036,08850 Da
isoelectric point:4,75517
aromaticity:0,08403
hydropathy:-0,40812

Domains

Domains [InterPro]
DC_0108
STR
25–355
DC_0108
A0A8S5QKC4
1 357
Architecture
STR
STR 25-355 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
A0A8S5QKC4
1 357
Domain Start End Length (AA) Confidence
N-terminal 1 215 215 0,9948
Central domain 216 346 132 0,9420
C-terminal 347 357 10 0,3062
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-215
Central
216-346
C-terminal
347-357

Taxonomy

  Name Taxonomy ID Lineage
Phage Siphoviridae sp. ctR1X1
[NCBI] 		2826331 Uroviricota > Caudoviricetes >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DAE19703.1 [NCBI]
Genbank nucleotide accession
BK015683 [NCBI]
CDS location
range 10043 -> 11116
strand +
CDS
ATGATTATGGAAACAAATGAATTAATTTTAAAACTAGATAAGGAAACTACAATTCCACTTATCGAGGGCTTAGGTAAAAGCGCCTATGCTATTGCAGTGGCTCATGGGTTCAGAGGTACTGAACAGGAATGGCTTGATAGTCTGAAAGGTTTACAAGGTCCGCAAGGCGAACCTGGACCGAAGGGCGCCCCATTCCAATATGAGGATTTCACCCCAGATCAATTAGAAGCCTTGAAAGGCCCTAAAGGTGATAAAGGTGAGGACGGGCGAGACGGCGCAAGTGCCTCGGCAGACAATGCTCATCAGTTGTTGCTGCAAGGTAACGTGTGGTGTGAAAGCGCCGAAATTGACGACGTGCTCACAGCCTTAATTGGCAATATGGGCAAGCCGTTTCCTCGTACTGAATTTAAGCCGTTGACTATTCCAAGCGTTATCCAAGGTCAACAAGTGGTAGCGGTAACAGGTGAGCCACATTATAGCGTTAAGGTGCTCGGTAATGATACACCTTTCACGCTAGATAGTACTGGGGCTTGTAGCGTGAATATTCCACCATTAGGCGAAGATGATATAAAGCTCACTTATCACAATTTCACAGGTGCAAAAGTTGGCGAAACAGTAATTGCTGGCATTCATAAAGATAATAGAACACCAGATGAAACTTACGAGGAAAATGGCGTTAAATATGCACTATTTGGTCGTAATTTAGAAATTAATGCAGTTAACTTTAATGGCGATTTCGAACATAATTTTAAATTCTTGGGTAAATGGCAAGTATCTGCAATCGATAATATCTTGATTCAGGCTAGACGTCCGACGGTTCTTAAAATTGGTGCTTGGTACGGTAGAAATTACTCTGTTAATGACGTATCTGACAATCCTATTGGCAATATTCCGATTTTAGTTGATAACCCTAAGAATTTAACATTTGAAAATAACGAAAAATCTGGTTTATTTGTTAAGCTCGGAAGCGTAGAATTTGGCACATCTGATGTTCAATTTACGACATCTCAAATTGAATGGTCTGACAGTCAACACAAATATGTAAATACTGGTGATTCAGTCGACCATTTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
67e27e84dd8b49af235905efa892f1d309e9c9a09d438657d050ecc921583ada
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8444
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50