Protein

View in Explore
Genbank accession
QFP93098.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MKQSVERLLKSLAPGSWFQGSHLFGKKTANSPELEAGELVNLSTVIGSPSELDQMQGIKFKDVFSTWKRIALNGSNPNASPEELDTWSFDDATDTVHCTVNSVSTVGFISPNAYDHYTFEVDISSSHGDDDGIGLCLAYVGEGTSAYSLCLYRQGGSNVQPAKSPVAPFALVYQPGVANLPGYDPTTRKVGGVVGNLVFPDGTPIPAEGISTNGLNLGWDALGVVRVKVVREGNVITCQTSKGRGDLTYDPANKFVIDLNSSDDLRKFIPPCRVGFIAYSQPNASFKSLLQPGVNDQIIDARTNSVWTYDGTNWNNAPFTAENAPVKEGRMYKNAITGSLYYVAGGFNFIRLN
Physico‐chemical
properties
protein length:353 AA
molecular weight: 38069,13140 Da
isoelectric point:5,18220
aromaticity:0,09915
hydropathy:-0,23399

Domains

Domains [InterPro]
DC_1887
STR
7–189
DC_1887
G3DSA:2.60.120.200
STR
63–301
G3DSA:2.60.120.200
QFP93098.1
1 353
Architecture
STR
STR 7-301 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QFP93098.1
1 353
Domain Start End Length (AA) Confidence
N-terminal 1 54 54 0,9886
Central domain 55 253 200 0,0858
C-terminal 254 353 99 0,8360
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-54
Central
55-253
C-terminal
254-353

Taxonomy

  Name Taxonomy ID Lineage
Phage Serratia phage PCH45
[NCBI] 		2608368 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QFP93098.1 [NCBI]
Genbank nucleotide accession
MN334766 [NCBI]
CDS location
range 62747 -> 63808
strand +
CDS
ATGAAACAATCGGTGGAAAGGCTTCTTAAGTCTTTAGCCCCCGGTAGCTGGTTCCAGGGATCTCATTTGTTCGGAAAGAAAACGGCAAATAGCCCTGAACTTGAGGCCGGTGAATTAGTTAACCTCAGTACAGTCATTGGTTCCCCTTCGGAACTTGACCAGATGCAGGGGATTAAGTTTAAAGATGTTTTCAGTACATGGAAACGCATTGCTTTAAACGGTAGTAACCCGAATGCGTCACCGGAGGAGCTGGATACCTGGTCTTTCGACGATGCGACTGATACAGTTCATTGTACAGTTAACTCTGTTTCCACCGTTGGTTTCATTAGCCCGAATGCCTACGATCATTATACGTTCGAGGTAGACATCTCGAGTTCGCATGGTGACGATGACGGGATCGGGCTATGTCTCGCCTATGTAGGTGAGGGAACCTCCGCTTACTCCCTTTGCCTTTATCGACAGGGCGGGTCAAACGTTCAACCTGCGAAAAGTCCAGTTGCACCGTTTGCGCTGGTTTATCAACCTGGTGTCGCTAATCTTCCGGGATACGATCCTACAACCCGTAAGGTTGGCGGTGTAGTAGGTAACCTCGTCTTCCCTGACGGTACGCCTATCCCAGCAGAGGGCATCAGTACCAACGGACTTAACTTGGGATGGGATGCACTGGGAGTAGTACGCGTTAAGGTTGTCCGTGAGGGTAACGTTATTACCTGCCAAACCTCGAAGGGACGCGGTGATTTAACTTACGACCCAGCGAACAAGTTTGTTATTGATCTCAATTCGTCAGACGACTTACGGAAATTCATCCCTCCGTGTCGTGTAGGCTTTATTGCATATAGCCAGCCGAATGCGAGTTTCAAATCACTTCTGCAACCGGGAGTGAATGATCAGATCATCGATGCACGTACTAACAGTGTATGGACCTACGACGGCACTAATTGGAACAACGCCCCTTTCACCGCAGAAAATGCACCAGTAAAAGAAGGGCGTATGTACAAGAATGCAATCACGGGTTCCCTTTATTACGTCGCGGGTGGTTTCAACTTCATCCGGCTAAATTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
d1637424a8f6a2a039c9e73d1fa81e062b1387a7b42fd49b7e76048c24343fcd
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5702
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Type III-A CRISPR-Cas RNA targeting inhibits a nucleus forming jumbophage Malone,L.M. and Fineran,P.C. 2019-09-25 — GenBank