Protein

View in Explore
Genbank accession
WVX92445.1 [GenBank]
Protein name
base plate tail tube protein
RBP type
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MYYSLMRESKVIVEYDGRAFHFDALSNYDIQTSYEEFKTLRRTVHRRTNYADSIINAQTPSSISLAVNFSNTLTEANFFEWLGFDRKGNTFLLPLYSSNIEPIMFNIYIVNKDNNCVYFENCYVSTVDFSLDKNIPILNVGIESGKFSEVSTYREAASIIQGEVMSYSPVIASTNGSILPGLISASLSFQQQCSWREDKSVFDINKIYNNKRAYVTEMNASATISLYYLKRFAGDMVYNVEPEIDVPLTIRNNNISIDFPSARITKRLEFSDVYRVEWDIIPTASSDPVRIDFFGEIKK
Physico‐chemical
properties
protein length:299 AA
molecular weight: 34331,31570 Da
isoelectric point:5,06580
aromaticity:0,13378
hydropathy:-0,20602

Domains

Domains [InterPro]
IPR056389
ATT
1–298
IPR056389
WVX92445.1
1 299
Architecture
ATT
ATT 1-298 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WVX92445.1
1 299
Domain Start End Length (AA) Confidence
N-terminal 1 242 242 0,6815
Central domain 243 288 47 0,2483
C-terminal 289 299 10 0,4825
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-242
Central
243-288
C-terminal
289-299

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoS_HZ_ZJUN2
[NCBI] 		3119841 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli NDM-1
[NCBI] 		1411081 Pseudomonadota > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > Escherichia > Escherichia coli

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WVX92445.1 [NCBI]
Genbank nucleotide accession
PP216084 [NCBI]
CDS location
range 21572 -> 22471
strand +
CDS
ATGTACTACTCTCTAATGAGAGAGTCAAAAGTTATAGTTGAGTATGATGGTAGGGCATTTCATTTTGATGCCCTATCAAACTATGATATACAGACTTCCTACGAGGAATTCAAGACTCTTCGTAGGACTGTTCATCGTAGAACTAACTATGCAGACTCTATTATAAATGCTCAAACTCCCTCTTCTATCTCTCTAGCAGTAAATTTTAGTAATACTCTTACTGAAGCTAACTTCTTTGAATGGTTAGGTTTTGATAGAAAAGGTAATACTTTCTTACTCCCACTATATAGTAGTAATATTGAACCTATTATGTTCAATATCTATATAGTAAATAAAGATAATAACTGTGTATATTTTGAAAACTGTTATGTATCTACGGTAGATTTTTCTTTAGATAAGAACATACCAATTCTTAATGTTGGTATTGAATCAGGAAAATTTTCCGAAGTATCTACATATAGAGAAGCAGCTTCTATTATACAGGGTGAAGTAATGTCTTACAGCCCAGTAATAGCTTCTACTAATGGCAGCATCTTACCCGGTCTTATTTCTGCCTCTTTATCCTTCCAACAGCAGTGCTCCTGGAGAGAGGATAAGAGTGTTTTTGATATAAATAAAATTTATAATAATAAAAGAGCCTATGTAACTGAAATGAATGCTTCGGCAACCATTTCTCTATACTACTTAAAACGTTTTGCAGGAGATATGGTTTATAATGTAGAACCGGAGATAGATGTACCTTTAACGATAAGAAATAATAATATTTCTATAGATTTTCCTTCAGCACGTATTACAAAACGCCTAGAGTTCTCAGATGTGTATAGAGTTGAGTGGGATATTATACCTACTGCTTCTTCAGACCCAGTGAGAATAGATTTCTTTGGAGAAATTAAAAAATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
07490ee5bcc9708f33e86136a766f7bd9f0baecc1ce3d31eee6f53422df9eac1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8292
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50