Protein

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Genbank accession
YP_010112479.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MVTKVDNKLRYSVKINYRDVLASICVNELTSLLSKVDFVQDRLMLKAMICHCKRQIGTDIPLGFTTICNLFTPYTEPECLHGRVIYNLVGGIEEAPIDGKLYARQNAKWSEVTGGGKIETNTPLVKPIMTVLWTNKRTGNTSNSLNINTEIGDTYKWSGNYMWQSKKNYKDPETMESNVFIELTEDGIQSPTVEMETLSNTNYYVTLKAPKTGYEIVDGQLVPATGDDEETVNSKITFLYPVYYGVKGNMNKQLVSSNNITISNITTSDSEYFVYKYPSNFPKLTTITLNDAYNVTQAFNYSEESFTTDIGLKLIMRVYTSANPGAFTNAKLNFK
Physico‐chemical
properties
protein length:335 AA
molecular weight: 37760,46840 Da
isoelectric point:5,87314
aromaticity:0,10448
hydropathy:-0,33970

Domains

Domains [InterPro]
DC_0730
STR
45–144
DC_0730
G3DSA:6.20.230.10
ATT
90–113
G3DSA:6.20.230.10
YP_010112479.1
1 335
Architecture
STR
ATT
STR
STR 45-89 | ATT 90-113 | STR 114-144 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010112479.1
1 335
Domain Start End Length (AA) Confidence
N-terminal 1 162 162 0,7382
Central domain 163 324 163 0,1703
C-terminal 325 335 10 0,9749
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-162
Central
163-324
C-terminal
325-335

Taxonomy

  Name Taxonomy ID Lineage
Phage uncultured phage cr109_1
[NCBI] 		2772083 Uroviricota > Caudoviricetes > Crassvirales > Loutivirinae > Buchavirus
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010112479.1 [NCBI]
Genbank nucleotide accession
NC_055892 [NCBI]
CDS location
range 30861 -> 31868
strand +
CDS
ATGGTCACAAAAGTAGATAATAAATTGAGATACTCTGTTAAAATAAATTACAGAGATGTTTTAGCATCTATTTGTGTAAATGAACTAACATCTTTACTTAGTAAAGTAGATTTCGTTCAAGATCGGTAGATGCTGAAAGCTATGATCTGTCATTGCAAAAGACAGATAGGGACAGACATTCCACTAGGATTTACTACTATATGTAATCTGTTCACTCCTTATACAGAACCTGAATGTTTACACGGTAGAGTAATATACAACTTAGTAGGAGGTATAGAAGAAGCGCCTATTGATGGTAAGTAGTATGCTAGACAAAATGCTAAATGGAGTGAAGTTACAGGTGGAGGAAAAATAGAAACAAACACTCCTCTAGTTAAACCAATTATGACAGTATTGTGGACTAATAAAAGAACCGGTAATACTAGTAATTCATTAAACATTAATACTGAAATAGGGGACACCTATAAATGGAGTGGTAACTATATGTGGCAATCAAAGAAAAATTATAAAGATCCTGAAACTATGGAAAGTAATGTGTTTATTGAATTAACAGAAGATGGAATACAATCTCCTACAGTAGAGATGGAAACATTATCTAATACTAATTACTATGTAACACTTAAAGCTCCTAAAACTGGTTATGAAATAGTAGATGGGCAGTTAGTACCGGCTACTGGAGATGACGAAGAAACAGTAAATAGCAAAATTACATTCCTATATCCTGTTTATTATGGAGTAAAAGGTAATATGAATAAACAATTAGTTTCTTCTAACAACATAACTATATCCAATATAACTACTAGTGACAGTGAATATTTTGTGTACAAATATCCTAGTAATTTTCCTAAGCTAACTACTATTACTTAGAATGATGCTTATAACGTTACACAAGCATTTAACTATAGTGAAGAATCATTTACAACTGATATAGGACTTAAATTAATAATGAGAGTATATACTTCTGCTAATCCAGGAGCGTTTACTAATGCTAAACTAAACTTTAAATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
da161384f3dc345570e6c3122faadbd7de589f840038b9d8710d68ab6c266cfe
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5097
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Taxonomic proposal: Crassvirales, a new order of highly abundant and diverse bacterial viruses Shkoporov,A.N., Stockdale,S.R., Guerin,E., Ross,R.P. and Hill,C. 2023-03-24 — GenBank