Protein

View in Explore

Genbank accession

AXH70882.1 [GenBank]

Protein name

tail fiber protein

RBP type

Evidence Phold

Probability 1,00

TSP

Evidence DepoScope

Probability 1,00

Protein sequence

MSTRAPAPYSVQWYQQLLRMAATTAEKDNDGDGFPDTIGGGGSSIDLYDQSKSYDAGDLVIRNDDLFQANQDIPAGTNFVIGLSGYTWREISSSVLVAADFTAGRNYPENALVIRDNVLLRAKVEIAGGPFSINQWEKLQVENAVKLTLAGYDETKTYDSNQMILDNGMLKYANQDGITGTFDASKWETVTANFTLKLRDYVNNGEFTEGELVLYDKRMYKANSDLSNPGDFDPADWTIVGGSGGIPAYLSSNTYLEGDVVTQGDYIYRAKESGISGAWNVSKWEEIAGRSRMRGDFVTGTSVVYKASDVVFHEGQLWKANSTITGPEDFNVGTSGATWSSLSRKGSITPYFTDHFYVKGDHVIYDRRIWSAKDSKLHGAWKEEEWDFVADVDIILNGYSAARKYFSGNLIRVGKKIYSCRIDIEPKAFDLDDWEDVSGVMQGEHDSTRAYEKDVIVIKNNRFYRANGNIPKNTNFSEGTSGTQFTEISPPANPSAPDWADGVTYARFDLVINEGTLFRCTTEHTADGSFDASKFTSLKADAAAVVAEFETGVNYVKEQLIVSAGTLWRARKAITNSTADDGPEGANSATNWQAVSLTYINISDHSATTYRQNELTVKNGKLYRANRNIDSAIAFSLDDWDPISEETLVVKEFSDSDTYKKDQIVHRNELLYIAVSDLTAGAWDDSNWMSVNPRNPWRGNFSSSGVYQVDDMVVHEQSLWRSTAATDGEVFSTNNWERVSGNIGARTWTSGTTFHKGDFVTNDKKLYVANSRFTATSTFSDSNLTLVGDFQTTIEDYSNSETYKVKDLVIHAGAIWKCEQDIDTAETFDANKWKMIARVKAIVSAHDSTLAYDEGEQVIYDNKLYIATKDLAVNTAFDADSGDWLLVSSDAVVTEAWEATTAVTSGEVRFVNGVRMKSRSARTTGGTLDDTELSNWVLEAVTSSNKATLTWDVAKVITPGMLIDLDGKIYEANGTLVNGSALTTETDLPSNDIGVVKALGYRFKLNGFDVTSDVSAGTDSSRMKFATVHIDKGDKIEVLPPVV

Physico‐chemical properties

protein length:	1043 AA
molecular weight:	115031,63770 Da
isoelectric point:	4,70072
aromaticity:	0,10547
hydropathy:	-0,40115

Domains

Domains [InterPro]

DC_1986
ATT
35–103

DC_1986 DC_1986 G3DSA:2.10.10.90 G3DSA:2.10.10.90 DC_1986 DC_1986 G3DSA:2.10.10.90 G3DSA:2.10.10.90 DC_1986

DC_1986
ATT
193–249

DC_1986 G3DSA:2.10.10.90 DC_1986 DC_1986

DC_1986
ATT
242–304

DC_1986 DC_1986

AXH70882.1

1 1043

Architecture

ATT

STR

ATT

STR

ATT

ATT 35-103 | ATT 139-304 | STR 305-388 | ATT 438-553 | ATT 596-747 | STR 748-781 | ATT 782-958 |

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
DC_1986	ATT	DC_1986	35	103	Novel HMM	DC_1986	N-terminal	Low	Positional only	693 proteins / 693 hits
DC_1986	ATT	DC_1986	139	198	Novel HMM	DC_1986	N-terminal	Low	Positional only	693 proteins / 693 hits
DC_1986	ATT	DC_1986	193	249	Novel HMM	DC_1986	N-terminal	Low	Positional only	693 proteins / 693 hits
G3DSA:2.10.10.90	STR	G3DSA:2.10.10.90	199	288	Merged direct domain	G3DSA:2.10.10.90	Central	Low	Positional only	29 proteins / 29 hits
DC_1986	ATT	DC_1986	242	304	Novel HMM	DC_1986	N-terminal	Low	Positional only	693 proteins / 693 hits
G3DSA:2.10.10.90	STR	G3DSA:2.10.10.90	299	388	Merged direct domain	G3DSA:2.10.10.90	Central	Low	Positional only	29 proteins / 29 hits
DC_1986	ATT	DC_1986	438	504	Novel HMM	DC_1986	N-terminal	Low	Positional only	693 proteins / 693 hits
G3DSA:2.10.10.90	STR	G3DSA:2.10.10.90	444	538	Merged direct domain	G3DSA:2.10.10.90	Central	Low	Positional only	29 proteins / 29 hits
DC_1986	ATT	DC_1986	493	553	Novel HMM	DC_1986	N-terminal	Low	Positional only	693 proteins / 693 hits
DC_1986	ATT	DC_1986	596	648	Novel HMM	DC_1986	N-terminal	Low	Positional only	693 proteins / 693 hits
DC_1986	ATT	DC_1986	646	747	Novel HMM	DC_1986	N-terminal	Low	Positional only	693 proteins / 693 hits
G3DSA:2.10.10.90	STR	G3DSA:2.10.10.90	652	739	Merged direct domain	G3DSA:2.10.10.90	Central	Low	Positional only	29 proteins / 29 hits
G3DSA:2.10.10.90	STR	G3DSA:2.10.10.90	746	836	Merged direct domain	G3DSA:2.10.10.90	Central	Low	Positional only	29 proteins / 29 hits
DC_1986	ATT	DC_1986	782	841	Novel HMM	DC_1986	N-terminal	Low	Positional only	693 proteins / 693 hits
DC_1986	ATT	DC_1986	837	958	Novel HMM	DC_1986	N-terminal	Low	Positional only	693 proteins / 693 hits

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout

N-terminal

Central

C-terminal

AXH70882.1

1 1043

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	819	819	0,9214
Central domain	820	1032	214	0,1124
C-terminal	1033	1043	10	0,0868

Note: Constraints were applied during segmentation.
Fixed 45 C-terminal predictions appearing before Central domain|C-terminal too short, adjusted boundary

Legend: N-terminal Central domain C-terminal

3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring

N-terminal
1-819

Central
820-1032

C-terminal
1033-1043

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Vibrio phage BONAISHI [NCBI]	2283011	Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host	Vibrio coralliilyticus [NCBI]	190893	cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Genbank protein accession

AXH70882.1 [NCBI]

Genbank nucleotide accession

MH595538.1 [NCBI]

CDS location

range 145070 -> 148201
strand +

CDS

ATGTCTACAAGAGCACCTGCACCGTATAGTGTGCAATGGTACCAGCAGTTACTAAGAATGGCTGCAACAACCGCAGAAAAAGATAACGACGGCGATGGATTTCCTGACACAATAGGTGGCGGCGGTTCATCAATCGATCTTTACGATCAATCTAAATCATACGATGCCGGGGACTTGGTCATCCGTAACGATGACTTATTCCAGGCAAACCAAGATATTCCGGCAGGAACTAACTTCGTTATTGGCCTATCCGGCTATACCTGGCGTGAGATATCGTCATCTGTATTAGTTGCTGCTGACTTCACTGCTGGACGCAACTATCCTGAAAACGCACTTGTCATTCGCGATAACGTTTTATTGCGCGCTAAAGTAGAGATTGCAGGCGGACCATTCTCCATCAACCAATGGGAAAAGTTACAGGTAGAGAATGCCGTCAAATTGACTCTAGCTGGCTATGACGAAACCAAAACCTATGACTCTAACCAAATGATCCTGGACAACGGCATGCTTAAGTACGCCAATCAGGATGGCATCACAGGAACATTCGATGCTTCAAAATGGGAAACCGTCACAGCCAACTTTACTTTGAAACTCAGAGATTATGTGAATAACGGAGAGTTTACAGAAGGCGAATTGGTCCTTTATGATAAGCGCATGTATAAGGCAAATTCTGATTTGTCTAATCCCGGTGATTTCGATCCAGCTGACTGGACCATTGTAGGAGGATCTGGCGGGATTCCTGCATATCTTTCATCTAATACTTACTTAGAAGGCGATGTTGTCACTCAAGGTGATTATATTTATCGCGCTAAAGAATCGGGCATCTCTGGTGCATGGAACGTAAGTAAATGGGAAGAGATTGCCGGTCGCTCTCGCATGCGTGGTGATTTTGTAACGGGCACTAGCGTTGTTTATAAAGCTTCAGATGTCGTCTTCCACGAAGGACAGTTATGGAAAGCAAATTCCACTATCACTGGACCAGAGGACTTTAATGTAGGTACGTCTGGCGCAACATGGAGCTCTCTGTCTCGTAAAGGATCAATCACTCCATATTTCACTGACCATTTCTATGTAAAAGGCGATCATGTAATTTATGATCGTCGCATCTGGTCTGCTAAAGACTCTAAACTTCACGGTGCGTGGAAAGAAGAAGAGTGGGATTTTGTTGCGGATGTTGATATCATTCTTAATGGATATTCGGCAGCACGCAAGTATTTCTCTGGCAACCTTATTCGCGTTGGCAAGAAGATCTATTCTTGTCGAATAGACATCGAACCAAAAGCATTCGATCTCGATGATTGGGAAGATGTTTCAGGCGTGATGCAGGGCGAGCATGATAGTACTCGTGCTTATGAAAAAGATGTGATTGTCATTAAGAATAATCGCTTCTATCGCGCTAACGGCAATATCCCTAAAAACACTAACTTCTCTGAAGGTACGTCGGGAACTCAGTTCACTGAGATTTCTCCTCCGGCAAATCCTAGTGCTCCTGACTGGGCAGACGGGGTAACTTACGCTCGATTTGATCTAGTCATCAATGAGGGCACGCTATTCCGCTGTACAACAGAACATACGGCAGATGGTTCTTTTGATGCATCTAAGTTCACCTCGTTGAAAGCAGATGCTGCCGCAGTTGTTGCTGAATTTGAAACTGGGGTAAACTACGTCAAGGAGCAATTAATTGTTTCAGCCGGCACCTTATGGCGAGCACGCAAAGCGATTACGAACTCTACGGCGGACGATGGTCCAGAAGGAGCTAACTCAGCGACTAACTGGCAAGCCGTATCCTTGACTTACATCAATATCTCTGATCATAGCGCCACAACTTATCGTCAGAATGAATTGACAGTTAAGAATGGTAAACTGTATCGTGCGAATAGAAACATAGATTCTGCAATCGCGTTTAGCCTCGATGACTGGGATCCTATTTCAGAAGAGACGCTGGTAGTTAAGGAGTTCTCTGATAGCGATACCTATAAGAAAGATCAGATTGTTCATCGTAACGAGCTTCTTTATATTGCCGTGTCAGATCTGACCGCTGGCGCATGGGATGATTCCAATTGGATGAGCGTTAATCCGCGCAATCCATGGAGAGGAAACTTCTCTAGCTCGGGAGTCTATCAAGTCGATGACATGGTCGTTCACGAACAGTCTCTCTGGCGTTCAACAGCCGCTACTGATGGCGAAGTATTCAGCACGAATAACTGGGAGCGTGTTAGTGGCAATATTGGCGCAAGAACATGGACTAGTGGAACTACTTTCCATAAAGGCGATTTCGTTACCAACGACAAAAAGCTTTACGTGGCAAATAGTCGATTCACAGCTACTTCGACATTCAGTGATAGTAACCTGACTCTAGTCGGAGATTTTCAGACGACGATTGAAGACTACTCAAACTCTGAGACCTATAAGGTTAAAGATCTCGTGATTCATGCCGGTGCAATCTGGAAATGTGAGCAAGACATCGATACTGCTGAAACCTTCGATGCGAATAAATGGAAGATGATTGCTAGAGTCAAAGCCATTGTTTCGGCGCATGATTCCACTCTAGCGTATGACGAAGGCGAGCAAGTTATTTACGATAACAAGCTTTATATTGCAACAAAAGATCTTGCAGTTAATACAGCCTTTGACGCTGATTCCGGAGACTGGCTATTGGTATCTAGTGACGCAGTGGTTACTGAAGCCTGGGAAGCAACAACCGCAGTGACTTCAGGCGAAGTAAGATTCGTTAACGGCGTCCGTATGAAGTCTCGCTCGGCGAGAACAACCGGCGGCACTTTAGATGATACTGAGTTATCTAACTGGGTTCTAGAGGCGGTTACGTCCAGTAACAAAGCAACGCTGACATGGGATGTTGCGAAGGTGATTACCCCTGGTATGCTTATCGACCTAGACGGAAAGATATATGAGGCGAATGGCACGCTAGTTAATGGCTCAGCATTGACTACTGAAACTGACCTTCCATCTAATGACATTGGGGTTGTTAAAGCGCTAGGTTATCGCTTTAAACTCAATGGCTTTGATGTCACCAGTGATGTCTCTGCAGGCACCGATTCATCCAGAATGAAGTTTGCTACAGTCCATATCGATAAAGGCGATAAGATTGAGGTCTTACCTCCGGTCGTTTAA

Genome Context

Tertiary structure

PDB ID

0447f9bb33b9bb2a063c8af93a09d8979790d36e7578914ebaebd114a63f5be4

ESMFold

Source ESMFold

Method ESMFold

Resolution 0,6478

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Literature

Title	Authors	Date	PMID	Source
Therapeutic potential of a new jumbo phage that infects the coral pathogen Vibrio coralliilyticus	Jacquemot,L., Bettarel,Y., Monjol,J., Corre,E., Halary,S., Desnues,C., Bouvier,T., Ferrier-Pages,C., Van Ngoc,B. and Baudoux,A.-C.	2018-10-24	—	GenBank

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

3D Structure with Domain Coloring

Domain Coloring

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence

Literature