Protein

View in Explore
Genbank accession
YP_010068739.1 [GenBank]
Protein name
tail fiber protein; host specificity
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,82
Protein sequence
MAVTGPWVGSSAVVNTGQNWMGGAAQRLRMGAPFWMSNMIGRSVEVIHTLGADHNFNGQWFRDRCFEAGSAPIVFNITGNLVSYSRDVPLFFMYGDTPNEYVQLNISGGAHMWGRGGQGGWTHSGGDGNGQQGGHCIQNDIGGRLRINNGGVICGGGGGGGGIAYRPHSGAKWQDIGGGGGRPFGPGGGGGYSGGAASYDGPGGGYNYGNAHSGQGGDAGANGQNAWHDGGKVLKVGAGGAAGYAVIGSTPTWQNVGAIYGPRV
Physico‐chemical
properties
protein length:264 AA
molecular weight: 26719,03380 Da
isoelectric point:8,46974
aromaticity:0,10227
hydropathy:-0,34167

Domains

Domains [InterPro]
IPR048291
ATT
1–40
IPR048291 IPR007932
DC_2135
STR
1–140
DC_2135
YP_010068739.1
1 264
Architecture
ATT
STR
RBD
ATT 1-40 | STR 41-140 | RBD 141-264
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoM_F1
[NCBI] 		2750846 Uroviricota > Caudoviricetes > Pantevenvirales > Tevenvirinae > Tequatrovirus
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010068739.1 [NCBI]
Genbank nucleotide accession
NC_054912.1 [NCBI]
CDS location
range 158264 -> 159058
strand +
CDS
ATGGCAGTAACAGGACCGTGGGTAGGATCGTCTGCAGTAGTTAATACAGGACAAAATTGGATGGGTGGCGCGGCCCAACGATTAAGAATGGGTGCTCCATTTTGGATGAGTAATATGATAGGTCGATCTGTTGAAGTAATTCACACACTTGGAGCGGACCATAACTTCAATGGTCAATGGTTCCGAGATAGATGTTTTGAGGCAGGTAGTGCACCTATAGTGTTTAATATCACTGGAAATTTGGTATCATATTCTAGAGATGTTCCTTTATTCTTCATGTATGGAGATACACCGAATGAATATGTTCAGTTGAATATTAGTGGCGGCGCCCACATGTGGGGTAGAGGTGGACAAGGTGGATGGACTCATTCCGGCGGAGATGGTAATGGCCAACAAGGTGGCCATTGTATTCAAAATGACATTGGCGGACGATTAAGAATTAATAACGGCGGAGTAATTTGTGGCGGTGGAGGCGGTGGTGGTGGTATCGCTTATCGTCCTCACTCTGGCGCAAAATGGCAAGATATTGGTGGTGGCGGAGGAAGACCATTTGGGCCAGGAGGCGGTGGTGGTTATTCCGGCGGCGCAGCTTCTTATGATGGCCCAGGAGGTGGTTATAATTATGGTAATGCTCACTCTGGCCAGGGTGGTGATGCTGGCGCAAATGGACAAAATGCCTGGCATGATGGCGGTAAAGTTCTAAAAGTCGGGGCTGGCGGAGCTGCTGGTTATGCCGTCATAGGGTCTACACCGACATGGCAAAACGTTGGAGCAATATATGGTCCAAGAGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
405ebaaae6d868cb1d2f7a2b0df1f41d190de09a35fae10fa645351e6c7d3269
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8086
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequences of eight phages infecting swine Enterotoxigenic Escherichia coli Ferreira,A., Oliveira,H., Silva,D., Almeida,C., Burgan,J., Azered,J. and Oliveira,A. 2020-09-03 — GenBank