Protein

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Genbank accession
YP_010663163.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,91
Protein sequence
MSFLIRRNRPKALAEWRDDFDRSDESPVQKPWYIWGGLPHQASIVAQALRFHDVNPIASFGGWSYEHTCFTPSWGVAFYFSGTPGGLAAQPFRFFINKSSWTKVNPNFTNSACVELLYRTPGISCVARIITFSGPSAMGNVMGEIEIPRSVFQGAWNFINVKIDQDKLVRVYLNDSLIINQALPAGYEAGIGSRSVNFASGILSPVSIDRFVLYDQYPPDPPFRVYNWAQEFYDDFNRANSSTVGNGWTQYGVNCGIDNNSFSTTGTTAGGRGIIRDSGITNGVQRVEAIIGGANGPSSAAASCLVLRSNSAGTSALSANFFSNKVYVARLSGTMIDPTMTDLAEQSATFANGDKVAFCTTDDYAWVERNGVTLLSTLGANTIPASQSYIGSRVERSGGFGSNSHSWNDLRIMS
Physico‐chemical
properties
protein length:414 AA
molecular weight: 45088,83400 Da
isoelectric point:6,43977
aromaticity:0,12077
hydropathy:-0,15676

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010663163.1
1 414
Domain Start End Length (AA) Confidence
N-terminal 1 173 173 0,0691
Central domain 174 372 200 0,2360
C-terminal 373 414 41 0,9586
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-173
Central
174-372
C-terminal
373-414

Taxonomy

  Name Taxonomy ID Lineage
Phage Gordonia phage CherryonLim
[NCBI] 		2652411 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010663163.1 [NCBI]
Genbank nucleotide accession
NC_070893 [NCBI]
CDS location
range 22011 -> 23255
strand +
CDS
ATGAGCTTTCTGATTCGGCGTAACCGCCCCAAGGCCTTGGCTGAATGGCGGGATGACTTCGACAGGTCGGATGAGTCTCCGGTTCAAAAGCCTTGGTATATCTGGGGAGGCCTCCCCCACCAGGCTAGTATCGTGGCGCAGGCGTTGCGTTTCCACGATGTGAACCCCATTGCGTCTTTTGGCGGGTGGTCTTACGAGCACACGTGCTTTACCCCGAGCTGGGGCGTGGCCTTCTATTTCTCTGGTACTCCTGGTGGATTAGCTGCGCAGCCCTTCCGTTTCTTCATCAACAAATCGTCTTGGACTAAGGTAAATCCAAACTTCACCAATTCGGCCTGTGTGGAGCTGCTGTACCGTACCCCTGGAATCTCGTGTGTGGCAAGGATTATCACATTCAGCGGTCCATCGGCTATGGGCAACGTGATGGGTGAGATCGAGATTCCCCGTAGCGTATTCCAGGGAGCATGGAACTTCATCAACGTGAAGATCGATCAGGACAAGCTGGTTCGGGTTTACCTTAATGATAGCCTCATCATCAATCAGGCCCTTCCCGCGGGATACGAAGCTGGCATCGGTAGCCGTAGCGTCAATTTCGCTAGCGGTATCCTTAGCCCCGTGTCGATCGATAGGTTTGTTTTGTACGATCAGTACCCGCCCGATCCGCCATTCCGCGTGTACAACTGGGCTCAGGAATTCTACGACGATTTCAACCGGGCCAACAGTTCTACAGTGGGGAACGGCTGGACCCAGTATGGGGTCAATTGCGGTATCGACAACAACAGCTTCTCGACCACAGGAACTACCGCAGGCGGTCGCGGCATCATACGAGATTCAGGAATCACCAACGGGGTTCAACGTGTGGAAGCCATCATTGGCGGAGCGAATGGCCCCAGTTCTGCTGCCGCTTCCTGTCTTGTCCTTCGTTCAAATAGTGCAGGTACGTCAGCGCTTTCAGCTAACTTCTTCTCGAACAAGGTATATGTGGCTCGACTGTCCGGGACCATGATTGACCCCACAATGACAGATCTAGCCGAGCAGTCCGCAACGTTTGCGAATGGTGACAAAGTGGCATTCTGTACCACCGATGACTACGCATGGGTGGAAAGAAACGGTGTTACCCTCCTGAGTACGTTGGGGGCCAATACCATACCGGCCTCTCAATCTTATATAGGCTCTCGGGTGGAGCGTAGTGGGGGGTTTGGGAGCAATTCCCATTCCTGGAATGACCTAAGGATAATGTCCTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
927440d5fb1c87f2efae56e25ba06f63c96db4ca2b277a4367215be993fe3832
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8064
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50