Protein

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Genbank accession
YP_009621207.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MTKITVGTPVTAPLTPGRDDTNVWPTHLAKYGAGGLEVVETTSDRDAISDERKVDKAVLVRSDDGGLPALYEWSSGGWNKVDIGDFSGMTITDGANVFNDILEIKLANITANQYPNDSVDSVTLTAQGSLDWATMGDPSSGSRATSVLVEPPLQTYPDPDNTGVTRLRVKEGSYEPMKAPGYLAYVDFPEKVIGKLGYHTLGHYDSAIWPTDVVVSGGGLIPTIANKKYIGLQEYDGKDPSKTGGTDFLVAFRVAFKGHAVNAGKIKAYLAKQPAPGTSASADYLRDVNGELLVREVNYKTGDEYGYIEVLGIVNAKGLTNMSMHVEHNFSDSLLIEERAVGLSGVMVQALESTSKTGAALMQYEVDTKQNIEFNKIYYGDSIMDFNWEATHGLPMEEIQAGVGANLPDGFHFKNLSNIHIGSENGHIYIHDAGTVCDFSLGKIFNAFDTRALHGKEINVKATIIDKDAPFTIGVVKWTGKPDQYTNNIFSSRNNAAVVFDSGWELVGSLFFPSDAVTGDHTLTKKFTVPSDAKNFAVIIYPGVPNSPLTLKIKDFDVDVVNPFYGYEMYVAGKLNELHLEEDTEFAHFSQANENYVSLRYTIGKSADGDPMPVGVLRKGKADITLDPSINKIVGSAATSGEGGLKFGKDGKAIVNTTLWIHSEQPDKTSSDVTFWYELVNSNGIATKIVPSETTFKVSGNSSGDYSMKEFSLDVITGDRIILKASADKDDGAFIQSNSPAHPLVDIEIRIDELTAFANDDPFTGIELDQFDKVYTGVLTATKYVSHTDSATFRIEVPDDMNVSVLEAIKKLDDGTVTTVKSLDWSYNLKSQMLTVYFGEVVEECAITLGIYTA
Physico‐chemical
properties
protein length:854 AA
molecular weight: 92762,84390 Da
isoelectric point:4,76864
aromaticity:0,09368
hydropathy:-0,21768

Domains

Domains [InterPro]
DC_0389
STR
1–854
DC_0389
YP_009621207.1
1 854
Architecture
STR
STR 1-854
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009621207.1
1 854
Domain Start End Length (AA) Confidence
N-terminal 1 354 354 0,5209
Central domain 355 564 211 0,2268
C-terminal 565 854 289 0,8583
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-354
Central
355-564
C-terminal
565-854

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage Ceto
[NCBI] 		2570300 Uroviricota > Caudoviricetes > Demerecviridae > Cetovirus > Cetovirus ceto
Host Vibrio harveyi
[NCBI] 		669 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009621207.1 [NCBI]
Genbank nucleotide accession
NC_042094.1 [NCBI]
CDS location
range 87406 -> 89970
strand +
CDS
ATGACAAAAATAACAGTTGGTACTCCAGTTACAGCACCTCTTACACCAGGTCGTGATGATACCAATGTTTGGCCAACACATTTAGCCAAGTATGGTGCTGGTGGTCTGGAAGTAGTAGAAACTACCAGCGATAGAGACGCCATTTCTGATGAAAGAAAGGTAGACAAAGCTGTACTAGTACGTTCAGATGATGGAGGGCTACCTGCCCTCTATGAATGGTCTTCAGGTGGCTGGAATAAAGTAGATATCGGAGATTTCTCCGGTATGACAATCACAGATGGAGCTAATGTCTTCAATGACATATTAGAAATAAAACTAGCTAATATAACAGCTAATCAGTATCCAAACGACTCAGTTGACTCTGTGACACTAACAGCACAAGGTTCTCTAGATTGGGCTACAATGGGTGATCCTTCCTCTGGTAGTAGAGCAACATCAGTATTAGTAGAGCCGCCTCTACAAACATACCCAGACCCAGATAATACAGGGGTTACTCGTCTCAGAGTGAAGGAAGGTTCCTATGAGCCTATGAAAGCTCCAGGATACTTAGCTTATGTCGACTTCCCTGAAAAAGTCATTGGTAAGCTGGGCTACCATACTCTAGGTCACTATGATAGTGCTATTTGGCCTACTGATGTTGTAGTATCAGGTGGTGGCCTAATCCCGACTATAGCAAACAAAAAATATATCGGATTGCAAGAGTATGACGGGAAAGATCCTAGTAAGACAGGTGGCACAGACTTTTTAGTAGCTTTCCGAGTTGCTTTTAAGGGTCACGCTGTAAACGCAGGTAAAATTAAAGCTTACCTAGCTAAGCAACCTGCACCTGGTACTTCCGCTTCCGCTGATTACCTAAGAGATGTAAACGGTGAGTTACTAGTTCGAGAAGTTAACTATAAAACCGGAGATGAGTACGGTTATATAGAGGTACTTGGTATTGTTAATGCCAAAGGCCTTACTAACATGTCTATGCATGTAGAGCATAACTTCAGCGACAGTTTACTTATCGAGGAACGAGCTGTAGGTTTGTCCGGTGTAATGGTACAAGCCCTAGAATCTACATCTAAAACCGGTGCTGCTCTAATGCAGTATGAAGTAGATACTAAGCAAAACATCGAGTTTAATAAGATCTATTATGGTGATAGTATTATGGATTTCAACTGGGAAGCTACTCATGGCCTACCAATGGAAGAAATCCAAGCGGGCGTAGGAGCAAACCTTCCGGATGGTTTCCACTTTAAAAACCTGTCAAACATTCACATCGGTAGTGAAAATGGCCACATCTATATACATGATGCTGGTACAGTGTGTGACTTCAGTCTAGGTAAAATCTTTAATGCCTTCGATACTAGAGCACTGCACGGTAAAGAAATCAACGTTAAAGCTACGATTATAGACAAAGATGCACCATTTACTATCGGCGTAGTTAAATGGACAGGAAAACCAGATCAATACACTAATAACATTTTCTCTAGCAGAAACAATGCGGCAGTAGTATTTGACTCTGGTTGGGAACTAGTAGGTTCATTATTCTTCCCTTCGGATGCTGTAACAGGTGACCATACCCTAACTAAGAAGTTTACAGTACCTTCGGATGCTAAGAACTTTGCGGTTATTATTTACCCTGGTGTACCTAATTCTCCACTTACACTGAAAATTAAAGACTTCGATGTTGATGTGGTTAACCCTTTCTATGGATACGAAATGTATGTGGCCGGAAAGCTTAATGAACTACACCTAGAAGAAGACACTGAGTTTGCTCATTTCAGTCAAGCTAATGAGAATTATGTATCTCTTCGCTATACAATAGGTAAGTCAGCAGACGGTGACCCAATGCCTGTAGGTGTTTTGAGAAAGGGTAAAGCTGATATTACATTAGACCCATCAATTAATAAAATTGTTGGTTCAGCTGCTACAAGTGGTGAAGGTGGTCTTAAGTTCGGAAAAGATGGTAAAGCTATTGTTAATACCACTTTATGGATTCACTCAGAGCAACCTGACAAAACCTCATCAGATGTTACGTTCTGGTATGAGCTGGTTAACTCTAATGGTATAGCTACTAAAATTGTACCGTCAGAAACTACCTTTAAGGTTAGTGGTAATTCTTCAGGGGATTACTCAATGAAAGAGTTTTCACTTGATGTAATAACTGGCGATAGAATCATTCTTAAAGCTTCTGCTGATAAGGATGACGGTGCATTTATTCAATCCAATTCACCTGCCCATCCGCTGGTTGATATTGAGATTAGAATTGATGAGCTAACAGCCTTTGCTAATGACGATCCATTTACAGGTATAGAGCTAGATCAATTTGATAAAGTATATACCGGAGTACTTACAGCTACTAAGTATGTATCACATACTGACTCAGCTACATTCCGTATTGAAGTACCAGATGATATGAATGTATCAGTACTAGAAGCTATTAAGAAGCTTGATGATGGTACAGTAACAACAGTGAAAAGCCTAGATTGGTCTTACAACTTGAAATCCCAAATGCTAACAGTATATTTTGGTGAAGTTGTAGAAGAATGTGCGATTACTCTAGGTATTTATACAGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
613000ec9bd394ac06142375b059df40fcd01c66dcdd8d5da5c085b55655e680
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4818
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50