Protein

View in Explore
Genbank accession
AYD85550.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MRLKISTYFDVGTWDKKFLLHGKSTGWMKANINDQGLDRCGDSYWFSGIHLGSGQSNINENTTNLQSPFMYVDKPMKDETKSFEDGDFIVWERELEYRVDGSEVTSVSEVSASWDSDIKTAISQVNLPETIQITKDMELVVKVKLVVRQSSKDTISGEIDFGAAKHQYVIKPCFYKMLDNYFIGSPLTQKDGRVYSGNIPIDLTQEPTGSIDSNLAIYDSYTYKSRSKTFSNFFTLSSPNSFTRTATSHTIGIPSAYGVEFTPPIDKTFNRELTLNYVIKWERDNG
Physico‐chemical
properties
protein length:286 AA
molecular weight: 32424,93300 Da
isoelectric point:5,34448
aromaticity:0,11888
hydropathy:-0,48601

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AYD85550.1
1 286
Domain Start End Length (AA) Confidence
N-terminal 1 240 240 0,4396
Central domain 241 275 36 0,1208
C-terminal 276 286 10 0,8954
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-240
Central
241-275
C-terminal
276-286

Taxonomy

  Name Taxonomy ID Lineage
Phage Acinetobacter phage vB_AbaM_B09_Aci01-1
[NCBI] 		2315466 Uroviricota > Caudoviricetes > Saclayvirus >
Host Acinetobacter baumannii
[NCBI] 		470 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Moraxellales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AYD85550.1 [NCBI]
Genbank nucleotide accession
MH800198 [NCBI]
CDS location
range 40436 -> 41296
strand +
CDS
ATGAGACTTAAGATTTCTACCTATTTTGATGTAGGTACTTGGGATAAGAAATTCCTGTTACATGGTAAATCTACAGGTTGGATGAAGGCCAATATTAATGATCAAGGTTTAGATAGATGTGGAGACAGTTACTGGTTTTCTGGAATCCACTTAGGCTCTGGTCAATCTAATATTAATGAAAATACAACTAATCTTCAATCACCATTTATGTATGTTGATAAACCTATGAAGGATGAGACTAAGTCCTTTGAAGACGGTGATTTTATTGTTTGGGAAAGAGAGCTTGAATACAGAGTCGATGGTTCAGAAGTGACTTCAGTTTCGGAGGTTTCAGCTTCTTGGGATAGTGACATAAAGACTGCCATTTCTCAAGTTAACTTGCCTGAAACAATTCAGATTACCAAAGATATGGAACTGGTTGTTAAGGTTAAGTTGGTTGTTAGGCAATCTTCAAAAGACACTATTTCAGGTGAAATTGATTTCGGTGCTGCCAAGCATCAATACGTAATAAAGCCATGTTTTTATAAGATGTTGGACAACTACTTTATTGGATCACCTCTAACTCAGAAAGATGGGAGGGTGTACAGTGGCAATATCCCTATTGACTTAACACAAGAGCCTACTGGTTCAATTGATAGTAATCTAGCTATATACGATAGTTACACTTACAAGTCAAGAAGTAAGACTTTCTCTAATTTCTTCACTTTAAGTAGTCCAAACTCTTTTACAAGAACTGCCACTTCACACACTATTGGAATTCCTAGCGCATATGGTGTCGAGTTCACACCACCTATCGATAAAACATTCAACAGAGAACTTACACTAAATTATGTAATTAAATGGGAGAGAGATAATGGCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
108fc2c228efbe326e6316cab39b85f1bb91b7f94ea71d9196294bba38081f5e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7705
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of five Acinetobacter baumannii phages from Abidjan, Cote d'Ivoire Essoh,C., Vernadet,J.-P., Vergnaud,G., Resch,G. and Pourcel,C. 2019-01-03 — GenBank