Protein

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UniProt accession
F1D083 [UniProt]
Protein name
Tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,60
Protein sequence
MALISQSIKNLKGGISQQPDILRYSDQGSKQINGFSSEVEGLQKRPPSVHVKRLTDQFGLGQKPYCHIINRDEVERYAVFFTGSNIRVFDLFTGDEKTVNAPNGLSYVTSSNPRKDLRMVTVADYTFILNRNVSTAQGTTNTPSGLAPFGHFGLVVIRGGQYGRTYRVKVNGSVEASFETPLGDQVEHAKQIDIAYIIDQLAAGLINRGWAVTKGSGYFYFSKSGTVLINSLEVEDGYNGQLAWGIINDVQKTTQLPVYAPNNYIIRVSGDPTLNQDDYYVKFDASRNVWTECPAPNIKADYNKDTMPHVLIREADGTFTFKQADWTHRAAGDDDTNPYPSFIGNSINDIFFFRNRLGFLSGENVILSGSGNYFNFFPESVAVLTDTDPIDVAVSTNRISILKYAVPFSEELILWSDQAQFVLSSDGGLTPTTVRLDLTTEFEVTEQTRPFGIGRGVYFVSPRAKFSSVRRFYAVQDVTQVKNAEDISAHVPSYVENGVFKMSGSSTENFLTILTEGNEQRVYFYKFLYLQEQLVQQSWSHWDFGVNCRVLCCDMIGAVMHLVIDSPSGVLMEKIEFTQNTKDYPDEPYRLYVDRKIEYTFPEGSYNDDDFKTRVKLKDIYGSTPANGQYVFISLGGVTFTFDPPAGGWQVNDGLIEFDGDLRGTKFFVGEAYTFLYEFSKFLIKTTDTAGGVATEDIGRLQLRRAWVNYDKSGNFRVEVNNQGRTFTYNMTGNRLSTNELILGDESLDTGQFRYAVSGNATQVTVSLISDTPNPLSIIGGGWEGYYVRRSSGI
Physico‐chemical
properties
protein length:794 AA
molecular weight: 88805,21610 Da
isoelectric point:5,15305
aromaticity:0,12469
hydropathy:-0,30655

Domains

Domains [InterPro]
IPR058003
TTP
1–794
IPR058003
F1D083
1 794
Architecture
TTP
TTP 1-794
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
F1D083
1 794
Domain Start End Length (AA) Confidence
N-terminal 1 148 148 0,9915
Central domain 149 348 201 0,0832
C-terminal 349 794 445 0,1455
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-148
Central
149-348
C-terminal
349-794

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage ICP3_2009_B
[NCBI] 		979539 Uroviricota > Caudoviricetes > Autographivirales > Studiervirinae > Chatterjeevirus
Host Vibrio cholerae
[NCBI] 		666 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Tertiary structure

PDB ID
225d7664cff89fefc5853a275e2ac9b4f49c712a258cc748cb15d76209469de9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8973
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50