Protein

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Genbank accession
XPZ16527.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect2
Probability 0,59
Protein sequence
MCGLVGFCATTNASDNEIALLKSLLAVDIIRGAHATGLAKIDPVKNEVGIHKRAVDAYDFLADPETKEFLDKGRARIYMGHNRYATMGDKTDHGNAHPFQVDHITMVHNGTVDTWGLHLLDGNDKYNVDSNMLCATIANHGAKKTFEEKFSGAAAVVWWDSKERSLNFIRNEDRPLFMAVTTTGTIVWASEPGMLKVFLERPNAKIRLRSPIAELKAEVLVTIPFTEAGVRKGAEPQTTPVTFLDLPIPESERQTAAWWSRYVGVSDYDDYSRSQGSQAGTKGSQAGSSYGTSGDAYARNTLRINNNLDAAGSTFKHRQLVTFDVVKIEAYANGSEYGTVTGIEREENLLIEAHGINVAKVHGYTVLRGSISNAYFIGQDRDLKVTVEDLAVSCLDPKHRPTPGETTPVLRIGTISSETKSHSKPRVQVGGTSGNTPPANITYPLKVQGHTFNNVHVFRDFVSQGCASCGKIPTAYDQRNRHLTVYEGAKFTGSLDECEFICGECVIENK
Physico‐chemical
properties
protein length:510 AA
molecular weight: 55862,16190 Da
isoelectric point:6,39106
aromaticity:0,08039
hydropathy:-0,35392

Domains

Domains [InterPro]
cd00352
STR
2–198
cd00352 DC_0532
IPR017932
STR
2–226
IPR017932
IPR029055
ATT
2–199
IPR029055
IPR029055
ATT
2–238
IPR029055
IPR029055
ATT
2–240
IPR029055
PF13522
STR
74–191
PF13522
XPZ16527.1
1 510
Architecture
ATT
STR
ATT 2-240 | STR 241-510
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XPZ16527.1
1 510
Domain Start End Length (AA) Confidence
N-terminal 1 132 132 0,2296
Central domain 133 458 327 0,6980
C-terminal 459 510 51 0,7655
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-132
Central
133-458
C-terminal
459-510

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage Clew-6
[NCBI] 		3388599 No lineage information
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XPZ16527.1 [NCBI]
Genbank nucleotide accession
PQ790660 [NCBI]
CDS location
range 10466 -> 11998
strand +
CDS
ATGTGTGGATTGGTAGGCTTCTGTGCCACAACTAACGCGAGTGATAACGAAATCGCTCTTCTCAAATCCCTCCTGGCCGTGGATATTATCCGTGGTGCTCACGCCACCGGTTTGGCCAAGATCGACCCGGTTAAGAACGAGGTAGGAATTCACAAGCGGGCAGTAGATGCCTACGACTTCCTGGCTGATCCTGAAACCAAGGAGTTCCTGGACAAGGGTCGGGCTCGCATCTACATGGGTCACAACCGTTACGCCACGATGGGCGACAAGACGGACCATGGGAATGCCCACCCCTTCCAGGTAGACCACATCACCATGGTACATAACGGCACCGTAGATACTTGGGGCCTGCACCTGCTGGATGGCAATGATAAGTACAACGTGGATTCGAACATGCTGTGCGCTACCATTGCCAACCACGGTGCCAAGAAGACGTTCGAGGAGAAGTTCTCTGGTGCTGCTGCGGTTGTCTGGTGGGACTCCAAGGAACGTAGCCTGAACTTCATCCGTAACGAGGATCGTCCTCTGTTCATGGCGGTTACCACCACCGGGACTATCGTATGGGCGTCTGAGCCTGGGATGCTCAAGGTTTTCCTGGAGCGACCCAACGCTAAGATCCGCCTGCGTTCTCCCATCGCTGAACTGAAGGCTGAAGTCCTGGTAACTATCCCGTTCACGGAGGCCGGAGTGCGAAAGGGTGCAGAACCCCAGACCACTCCGGTCACGTTTCTGGACCTCCCAATTCCCGAAAGCGAAAGGCAAACAGCGGCATGGTGGAGTCGCTACGTCGGTGTCTCGGACTACGATGACTACAGCCGAAGCCAAGGCAGCCAAGCGGGAACGAAAGGCAGCCAAGCGGGCTCGTCGTATGGAACGTCTGGCGATGCGTACGCAAGGAACACCCTCCGGATCAACAACAACCTCGACGCAGCAGGTAGCACCTTCAAGCACCGGCAACTCGTCACCTTCGATGTTGTCAAGATCGAGGCCTACGCAAACGGCAGCGAGTACGGAACTGTCACTGGAATCGAGCGTGAAGAAAACCTTCTCATCGAAGCTCATGGCATCAACGTCGCCAAGGTCCACGGATACACCGTCCTCCGAGGGAGTATCTCCAACGCATACTTCATCGGCCAAGACCGTGATCTCAAAGTTACTGTCGAGGATCTGGCGGTAAGTTGCCTGGACCCAAAGCATCGGCCGACTCCTGGGGAGACTACCCCAGTGTTGAGGATTGGAACGATCTCATCGGAGACGAAATCCCATTCTAAACCCAGGGTTCAAGTCGGCGGCACCTCGGGGAACACCCCTCCGGCCAACATCACCTACCCCCTGAAGGTGCAAGGCCACACCTTCAACAACGTGCATGTCTTTCGGGACTTCGTGTCCCAAGGGTGTGCATCTTGCGGGAAGATCCCAACCGCATATGACCAGCGTAATCGTCATCTGACGGTATACGAAGGTGCCAAGTTCACTGGTAGCCTAGATGAGTGCGAGTTCATCTGTGGCGAGTGTGTAATCGAAAATAAATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
5374e240e329d3a0eb83e4e62ea15b6365299b90a3dda08d93da8178d8fed2df
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5712
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A biofilm-tropic Pseudomonas aeruginosa bacteriophage uses the exopolysaccharide Psl as receptor Walton,B., Abbondante,S., Marshall,M.E., Dobruchowska,J., Alvi,A., Gallagher,L.A., Vallikat,N., Zhang,Z., Wozniak,D.J., Yu,E.W., Boons,G.-J., Pearlman,E. and Rietsch,A. 2025 — GenBank