Protein

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Genbank accession
ATN93927.1 [GenBank]
Protein name
putative short tail fiber protein
RBP type
TSP
Evidence RBPdetect
Probability 0,66
Protein sequence
MTGGYIQGKRVVTQNEIDRTIPVGAIMMWAADSLPSDAWRFCHGGTVSASDCPLYASRIGTRYGGSSSNPGLPDMRGLFVRGSGRGSHLTNPNVNGNDQFGKPRLGVGCTGGYVGEVQKQQMSYHKHAGGFGEHDDSGAFGNTRRSNFVGTRKGLDWDNRSYFTNDGYEIDPASQRNSKYTLNRPELIGNETRPWNISLNYIIKVKE
Physico‐chemical
properties
protein length:207 AA
molecular weight: 22699,92130 Da
isoelectric point:9,17103
aromaticity:0,09662
hydropathy:-0,70531

Domains

Domains [InterPro]
IPR037053
ATT
10–76
IPR037053 IPR044916
IPR037053
ATT
10–85
IPR037053 IPR027448
SSF88874
STR
13–205
SSF88874
IPR011083
ATT
24–80
IPR011083
G3DSA:4.10.1070.10:FF:000001
Unmapped
77–198
G3DSA:4.10.1070.10:FF:000001
ATN93927.1
1 207
Architecture
ATT
STR
ATT 10-85 | STR 86-205 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ATN93927.1
1 207
Domain Start End Length (AA) Confidence
N-terminal 1 193 193 0,0874
Central domain 194 196 4 0,0020
C-terminal 197 207 10 0,9965
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-193
Central
194-196
C-terminal
197-207

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage SAJK-IND
[NCBI] 		2041337 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Staphylococcus aureus
[NCBI] 		1280 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ATN93927.1 [NCBI]
Genbank nucleotide accession
MG010123 [NCBI]
CDS location
range 51 -> 674
strand +
CDS
ATGACCGGTGGTTATATTCAAGGTAAGCGTGTTGTAACGCAGAATGAAATAGACAGAACTATTCCTGTCGGAGCTATTATGATGTGGGCGGCTGATAGCCTTCCTAGTGATGCTTGGCGCTTCTGTCATGGCGGAACTGTTTCAGCATCAGATTGTCCATTATATGCTTCTAGAATTGGAACAAGATACGGCGGAAGTTCATCAAATCCTGGATTACCTGATATGCGTGGCCTTTTTGTTCGCGGCTCTGGTCGTGGCTCTCACTTAACAAATCCAAACGTTAATGGTAATGACCAATTTGGCAAGCCTAGATTAGGCGTAGGTTGTACCGGTGGATATGTTGGCGAAGTACAAAAACAGCAGATGTCTTATCATAAACACGCTGGCGGATTTGGTGAGCATGATGATTCTGGAGCATTCGGTAATACCCGTAGATCAAATTTTGTTGGTACACGTAAAGGACTTGACTGGGATAACCGTTCATACTTCACCAATGACGGTTATGAAATTGACCCAGCATCACAACGAAATTCCAAATATACACTAAATCGTCCTGAATTAATTGGAAATGAAACACGTCCATGGAACATTTCTTTAAACTACATAATTAAGGTAAAAGAATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
77183cecb3d810abe96bdd16216cefe904ef072e90ae72bf95953743d1f339d3
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6729
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome sequence of SAJK-IND Staphylococcus aureus phage from India Ganaie,M.Y., Qureshi,S., Gandham,R., Kashoo,Z., Wani,S., Maqbool,R., Sikander,P., Malla,W.A., Mondal,P. and Khan,R.I.N. 2023-09-01 — GenBank