Protein

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Genbank accession
QOI69422.1 [GenBank]
Protein name
putative tail sheath protein
RBP type
TSP
Evidence RBPdetect2
Probability 0,62
Protein sequence
MADIYDIPEFITQEVTIVTLDKEPGELNADTSVYLMEGESQPDSNYILSLRGANTELKRGDIIAFSDVLTDPRFRILAISDSIVNGEAFTNITYEGTEDSEAIVEATKGFPVYLVKATKSSCVEVPVEGSETKYDASEYELYDHTISNFNTFDEDKLSKPFVYKDAKLKIFAKTPGEWGNKIDVAIAHPDDFNKGKYITDGIPLDSQFDYIPYGDQFAVIVIYANEIQESFIVSLGLTDKNEKNEFTYIETMINGKSSYILVSVNEAVQGKPKTCLGEDLLKLENGMDSAPGIGDIIDAYTIFDNKEEIDVDILICNETYPKAATDIAITRGDCIAFMGAPKSCSVGYKSTIANQKTLDFRKSLNIDSKYVTLCSNYKYQYCAELGGYRWLNLAADIAGLKAQTNYNQANWYAAAGLNRGLIKNCEALAYSPTGAMRDSNKMLLI
Physico‐chemical
properties
protein length:445 AA
molecular weight: 49332,95050 Da
isoelectric point:4,48684
aromaticity:0,10337
hydropathy:-0,23955

Domains

Domains [InterPro]
DC_1554
STR
139–269
DC_1554 G3DSA:3.40.50.11780
G3DSA:3.40.50.11780
STR
281–420
G3DSA:3.40.50.11780
QOI69422.1
1 445
Architecture
STR
STR
STR 139-269 | STR 281-432 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QOI69422.1
1 445
Domain Start End Length (AA) Confidence
N-terminal 1 59 59 0,9366
Central domain 60 258 200 0,5944
C-terminal 259 445 186 0,3498
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-59
Central
60-258
C-terminal
259-445

Taxonomy

  Name Taxonomy ID Lineage
Phage Campylobacter phage F379
[NCBI] 		2776767 Uroviricota > Caudoviricetes > Connertonviridae > Firehammervirus F379 >
Host Campylobacter jejuni RM1221
[NCBI] 		195099 Campylobacterota > Epsilonproteobacteria > Campylobacterales > Campylobacteraceae > Campylobacter > Campylobacter jejuni RM1221

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QOI69422.1 [NCBI]
Genbank nucleotide accession
MT932329 [NCBI]
CDS location
range 110899 -> 112236
strand -
CDS
ATGGCAGATATCTACGATATACCAGAGTTTATAACTCAAGAAGTAACTATTGTTACTTTAGACAAAGAACCAGGTGAACTAAATGCAGACACTTCAGTATACTTAATGGAAGGTGAATCTCAACCAGATTCTAATTATATTTTAAGTCTTAGAGGTGCTAACACTGAATTAAAACGCGGAGATATTATAGCATTTTCTGATGTTTTAACTGATCCAAGATTCAGAATCTTAGCAATCTCTGACAGTATAGTCAATGGTGAAGCTTTCACAAATATTACTTATGAAGGAACTGAGGATTCTGAAGCTATTGTTGAAGCAACTAAAGGTTTTCCAGTTTATTTAGTTAAGGCTACTAAATCGTCTTGTGTTGAAGTTCCTGTAGAAGGTTCTGAAACCAAATACGATGCGTCAGAATATGAACTTTATGATCATACCATTAGTAACTTCAATACATTTGATGAAGATAAATTATCTAAACCATTTGTTTATAAAGATGCAAAATTAAAAATATTTGCTAAAACACCGGGAGAGTGGGGCAATAAAATTGATGTCGCAATCGCACACCCTGATGATTTCAACAAAGGAAAATATATCACTGATGGTATACCATTAGATTCTCAATTTGATTATATTCCTTATGGTGATCAATTTGCTGTTATTGTTATCTACGCAAACGAAATTCAAGAATCATTTATTGTAAGCTTAGGCTTAACTGATAAAAATGAGAAAAATGAATTTACTTATATAGAAACAATGATTAATGGCAAGTCAAGCTATATCTTAGTTTCTGTAAATGAAGCAGTTCAAGGTAAACCAAAAACTTGTTTAGGTGAAGATTTACTTAAACTTGAAAATGGTATGGATTCAGCTCCAGGTATTGGCGATATTATAGACGCTTATACAATTTTTGACAACAAAGAAGAAATCGATGTTGATATCTTAATTTGTAACGAAACTTATCCAAAAGCAGCTACTGATATTGCGATTACTCGTGGTGACTGTATAGCATTTATGGGTGCACCAAAAAGTTGTTCAGTGGGTTATAAATCTACAATTGCTAATCAAAAAACACTTGATTTTAGAAAATCTTTAAATATAGATTCTAAATATGTAACTTTGTGTAGCAATTACAAATATCAATACTGTGCTGAGCTTGGTGGTTACAGATGGCTGAACTTAGCTGCAGATATTGCAGGTCTTAAAGCTCAAACAAATTATAATCAAGCTAACTGGTATGCAGCTGCTGGTCTTAACAGAGGTCTCATTAAAAACTGCGAGGCGTTGGCATATAGCCCAACTGGTGCGATGCGTGATAGCAACAAAATGCTTTTAATATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
1c82b305124c96401ad46439b9723542c577abc8c41f8249fcf05bf8e4d9c0cd
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5742
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50