Protein

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Genbank accession
YP_007004288.1 [GenBank]
Protein name
tail collar fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MSTNTLKHISDKSEFKSFDPTGSNFPPDITNVQEALATISLIGVTGNVPSATETSQGIIRLATTQEVMDGLDAYSAVTPATLKARLDIPTQATETYVGITRYATNAEAIAGTEPQAAIVATSLKAVMDYTFENRLSTENATGVIKISTTPAALAGTDDTTAMTPLKVSQAIGAATAALPVYSTATTTNEGLVRLATNAEVGNGSLSVGIAISPAGLATLTSTEARSGIIKLAGWDMVSNGTDHTAAVTPASLLARTGNTGRIGLVRLSTTVGQGDGNTALAYNANVISTSGGEIWGTLNVNGALRRNGVDVVTHDQLSDSVPVGTICMWGGNEGNIPGKWRACVGGTYTGGAYLNAVGGRWGWWGAIPDFRGLYPRGANMVGGYSEGEVNPHIAGNRGQDGKGKARLGNGVGSFPQSSVQAQALRYHKHAGGFGEHDNYGAFGNTANSGYVGTRKGLDWDNRSYYTNEGFETTDPWNRDGHTTLNSEGLIANETRPWTMSVLFIIKVE
Physico‐chemical
properties
protein length:508 AA
molecular weight: 52989,21380 Da
isoelectric point:5,57559
aromaticity:0,06890
hydropathy:-0,20453

Domains

Domains [InterPro]
DC_0176
STR
1–423
DC_0176
G3DSA:2.10.280.10
Unmapped
248–285
G3DSA:2.10.280.10 IPR037053 IPR044916
SSF69349
STR
248–333
SSF69349 IPR027448
IPR015173
STR
251–309
IPR015173 SSF88874
YP_007004288.1
1 508
Architecture
STR
ATT
STR
STR 1-309 | ATT 310-371 | STR 372-507 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage Bp7
[NCBI] 		1052121 Uroviricota > Caudoviricetes > Pantevenvirales > Tevenvirinae > Dhakavirus
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_007004288.1 [NCBI]
Genbank nucleotide accession
NC_019500 [NCBI]
CDS location
range 148703 -> 150229
strand -
CDS
ATGTCAACAAACACACTAAAACACATTAGTGATAAATCGGAATTCAAATCATTCGACCCTACTGGGTCGAATTTCCCGCCTGATATTACTAATGTTCAAGAAGCATTGGCCACTATTTCATTAATCGGCGTCACAGGTAATGTTCCTTCAGCCACAGAAACATCCCAAGGTATTATTCGTCTTGCAACCACACAAGAAGTAATGGATGGATTGGATGCTTATAGTGCGGTGACTCCAGCAACTTTAAAAGCCCGTTTAGATATTCCTACTCAGGCAACAGAAACTTATGTAGGTATCACCCGTTATGCTACTAACGCTGAAGCTATAGCAGGCACAGAGCCCCAGGCTGCAATCGTAGCAACCTCTTTGAAAGCGGTAATGGATTATACATTTGAGAACCGTTTATCAACAGAGAACGCTACAGGCGTTATCAAGATTTCAACTACACCTGCCGCATTAGCTGGTACCGATGATACCACAGCAATGACCCCACTTAAAGTATCTCAGGCAATTGGTGCAGCGACGGCAGCGTTACCGGTTTATTCTACAGCAACGACTACAAATGAAGGTTTAGTTCGTTTAGCGACCAATGCCGAGGTTGGTAATGGAAGTCTTTCGGTGGGTATTGCTATTTCTCCAGCCGGATTAGCCACATTAACTTCCACCGAAGCCAGAAGTGGTATTATTAAACTCGCTGGTTGGGATATGGTATCTAATGGTACCGACCACACTGCCGCTGTTACACCTGCTTCTTTGTTAGCTCGTACAGGTAATACTGGACGTATTGGGTTGGTTCGTTTATCTACTACTGTAGGCCAAGGCGATGGTAATACGGCACTGGCTTATAATGCTAACGTTATTTCTACTTCAGGCGGCGAAATATGGGGTACTTTAAACGTTAATGGAGCATTACGTCGTAATGGTGTTGATGTTGTTACCCATGACCAATTATCAGATAGCGTTCCGGTGGGTACTATTTGCATGTGGGGTGGCAATGAAGGTAATATACCTGGTAAATGGCGTGCTTGTGTAGGTGGGACTTACACTGGTGGTGCATATTTAAATGCTGTTGGTGGGCGTTGGGGATGGTGGGGTGCTATTCCAGATTTCCGTGGATTATATCCTCGTGGCGCTAACATGGTTGGTGGATATTCTGAAGGCGAAGTTAACCCGCATATTGCTGGTAACCGAGGACAAGACGGTAAAGGTAAGGCCCGTTTAGGCAACGGTGTTGGTTCGTTCCCACAATCTTCCGTTCAAGCCCAAGCATTACGTTATCATAAACATGCTGGTGGTTTTGGTGAACATGATAACTATGGCGCTTTTGGTAACACCGCTAACTCCGGATATGTTGGTACTCGTAAAGGCCTTGACTGGGATAACCGTAGTTATTATACCAACGAAGGTTTTGAGACCACCGATCCTTGGAACCGTGATGGACATACCACATTGAATAGTGAAGGTCTTATTGCCAACGAAACACGTCCATGGACAATGTCCGTTCTTTTTATTATTAAAGTAGAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5e34a049edd53f4d70986b7e1a5571e9b4140bd2f0d14d08272ed215d3c2936c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6739
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Morphological observation on lytic cycle of bacteriophag Bp7 Liu,X., Ren,H., Liu,W., Wen,J., Zou,L. and Liu,C. 2010 — GenBank
Complete genome sequence and analysis of polyvalent Phage Bp7 of E. coli Wu,D. and Ren,H. 2013-06-12 — GenBank