Protein

View in Explore
Genbank accession
XYA29280.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MANKPTKPNFPLGLESQDQSVFQEGILNNGVVEHGPDAVMTVPETPDASGVPSAVRYNEYDDQFEGFYNEGGWLPLGGGNGGRWEALPHASSSLLQAGRAYLVDNTDGVSTVLFPSPKRVGDSVTVCDLYGKFSTYPLTVDGNGKSIYGSADSMTISTDNVSATFTWTGEARGWVITSGVGLGQGRVYSREIYSQVLSAETSSITLSTQPTIVDVYADGKRLKESLYTLDGYDVKFDPALASGSDVQIIQYIPIQLGAGGGGSGGTVITWEYNGGAAVGGETQIVLDVVVDSVSEIYIRGQRQQIGRGFTFDAETSTITLADELETGDDVVVIINGDPTVYNQIDRTPWEVARANNVRNDEVILSTDKQTVLDGKTVLYDVATQTSWMIPDGIPSGSKIVSVSLGILSVTAGLSYNLIKIFEKGLVPYNSVYFEDNSTLKSYIEFKTPESFGAFGDGIHDDSTSLQNALNWLTQKAYRKLVFNPGKVYFHTVPLIATFSGASSVGCSLIMEGVLYPSPDVGDALTITESMYCEFKLKVKGDGYNISTLPDYSQADPVGCQQAFVINSCRGCKVEVFGYSYGGRVIRTKGTGVTKMSFIDLSIKTGEGSCGQAAYLQATSDAYGRITHAQTQWDYYGIVLDKLTDVTISYWEYGNKNSAVPAMLINDCGSLDASNVTGGSTWDSDTSTTLKIVGGQGIHFSRLQVGEAYHGLVIEGSGTVDDKPTVTVDYVLSYKTNVSVTLVNTTGVNIKSGLCDNTYHGVVYQGNIYNCKVNLDGRNNFTDMHYAPVGTNINSLDIGGGLYSELSTHFVNMLNAVVKQLGVYNTNVVTLGRYLFLPSDNGCVVIGGKWSGSTQVSPIDYRPKHISNVFGVNTKFLSAGTVFLAGTSQGATKTINHGLWATPYEVSIVPYNVNAGSTFSSGNIVIKSLTSSEIVLMYTGSSPLTGDIYLLVNISCETRVS
Physico‐chemical
properties
protein length:960 AA
molecular weight: 102942,91260 Da
isoelectric point:4,75563
aromaticity:0,09687
hydropathy:-0,07729

Domains

Domains [InterPro]
DC_0041
STR
1–691
DC_0041 DC_1132
G3DSA:3.30.2020.50
ATT
341–421
G3DSA:3.30.2020.50 IPR012334
XYA29280.1
1 960
Architecture
STR
ATT
STR
RBD
STR 1-340 | ATT 341-421 | STR 422-749 | RBD 750-960
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XYA29280.1
1 960
Domain Start End Length (AA) Confidence
N-terminal 1 461 461 0,9951
Central domain 462 849 389 0,9869
C-terminal 850 960 110 0,9273
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-461
Central
462-849
C-terminal
850-960

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage vB_KpnM-Bestiario
[NCBI] 		3447922 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYA29280.1 [NCBI]
Genbank nucleotide accession
PV891801 [NCBI]
CDS location
range 110153 -> 113035
strand +
CDS
ATGGCTAATAAACCCACGAAACCAAATTTTCCGCTTGGGCTTGAATCACAAGATCAATCCGTATTTCAAGAAGGTATTCTGAATAATGGTGTTGTAGAACATGGCCCAGATGCGGTAATGACTGTGCCAGAAACTCCTGACGCATCTGGGGTTCCTTCTGCTGTCCGTTATAATGAATATGACGACCAGTTTGAAGGATTTTACAACGAAGGCGGCTGGTTGCCGCTTGGTGGCGGTAACGGTGGGCGCTGGGAAGCACTTCCTCATGCTTCCTCTTCCCTGTTACAAGCAGGACGTGCATATCTGGTAGATAATACGGACGGCGTCTCTACGGTGCTGTTCCCTTCCCCTAAACGGGTTGGTGACAGTGTTACTGTTTGTGACCTTTATGGTAAATTTTCCACTTATCCTCTGACTGTAGACGGTAACGGTAAATCGATCTATGGCTCTGCTGATAGCATGACGATTTCTACCGATAATGTCAGTGCGACTTTCACATGGACTGGTGAAGCCCGTGGCTGGGTTATTACATCAGGCGTCGGTCTGGGACAAGGTCGAGTTTACAGCCGCGAAATCTATAGCCAAGTTCTGTCTGCTGAAACATCTTCTATCACCCTCAGCACTCAGCCGACGATTGTAGATGTTTATGCAGATGGGAAACGTCTGAAAGAATCCCTGTATACTCTTGACGGTTATGATGTCAAATTCGACCCGGCGTTGGCCTCTGGTTCTGATGTGCAGATTATTCAGTATATCCCAATTCAGCTTGGCGCGGGCGGCGGGGGTTCTGGTGGTACTGTAATCACCTGGGAATACAACGGCGGCGCGGCAGTCGGCGGCGAGACTCAAATCGTTCTGGACGTAGTCGTTGATTCCGTTTCCGAGATCTATATCCGTGGGCAGCGTCAACAGATCGGTCGCGGGTTCACTTTTGATGCAGAGACCAGTACAATCACGCTTGCTGATGAATTGGAAACTGGCGATGATGTCGTCGTTATTATTAATGGCGATCCAACGGTCTATAACCAGATTGATCGTACTCCTTGGGAAGTGGCTCGTGCAAATAATGTGAGAAATGATGAAGTCATACTCAGCACCGACAAACAGACCGTGTTGGATGGAAAAACCGTTCTCTATGACGTGGCAACTCAGACTAGCTGGATGATACCGGATGGTATACCATCCGGTTCTAAAATAGTTTCTGTGTCTCTTGGTATCCTTTCTGTTACTGCTGGGTTATCATATAATTTAATTAAAATATTTGAGAAAGGTTTAGTACCTTACAATTCGGTTTATTTCGAAGATAACTCAACTTTAAAATCTTACATAGAATTCAAAACCCCAGAAAGTTTTGGCGCTTTTGGTGACGGAATCCATGATGATTCTACATCATTACAAAACGCTTTGAATTGGTTGACGCAAAAGGCATATAGAAAATTAGTTTTTAACCCAGGGAAGGTTTACTTTCACACGGTTCCATTGATCGCCACATTTTCTGGGGCATCTAGTGTGGGTTGTTCTTTAATTATGGAAGGTGTGCTGTACCCATCGCCAGACGTAGGTGACGCCCTCACTATAACAGAATCGATGTATTGTGAATTTAAATTAAAAGTGAAGGGTGATGGTTACAATATATCTACGTTGCCAGATTATTCACAAGCGGACCCCGTCGGTTGTCAGCAAGCATTCGTTATTAATTCTTGCCGAGGCTGTAAAGTGGAAGTTTTTGGTTATAGTTACGGTGGTAGGGTCATCAGGACCAAAGGGACCGGCGTTACTAAAATGTCCTTTATCGACTTATCAATAAAAACCGGTGAAGGAAGTTGTGGGCAAGCGGCCTATTTGCAAGCTACTTCAGATGCGTATGGGCGTATTACTCATGCACAAACTCAATGGGATTATTACGGAATTGTTTTAGATAAGTTGACGGATGTCACAATCAGTTATTGGGAATATGGAAATAAAAATTCTGCTGTTCCTGCAATGCTTATTAATGACTGCGGAAGTTTGGATGCTTCTAATGTTACTGGCGGTTCAACATGGGATTCTGATACTTCCACAACTTTAAAAATCGTTGGAGGACAAGGAATACATTTCTCTCGTTTGCAAGTTGGAGAAGCATATCACGGGCTTGTGATAGAAGGATCAGGCACGGTGGATGATAAGCCTACGGTGACAGTAGATTATGTTTTGAGCTACAAAACTAATGTTTCCGTAACTCTTGTTAATACAACGGGAGTGAATATAAAATCAGGATTGTGCGACAATACGTACCATGGAGTTGTTTACCAAGGAAATATCTATAACTGTAAAGTAAATTTAGATGGAAGAAATAATTTTACTGATATGCATTATGCTCCGGTAGGCACAAATATAAATTCTTTGGACATAGGTGGTGGACTGTATTCAGAATTGTCTACACATTTCGTTAACATGCTTAATGCCGTTGTCAAACAGTTAGGTGTCTACAACACTAATGTTGTGACATTAGGTCGTTATTTATTCCTCCCATCTGACAACGGTTGTGTCGTTATAGGTGGGAAATGGTCAGGAAGTACGCAAGTAAGCCCTATCGATTATAGGCCCAAACATATATCTAACGTGTTTGGTGTTAACACCAAATTTCTAAGCGCAGGTACGGTGTTTCTTGCTGGCACTAGTCAGGGTGCCACTAAAACTATCAATCATGGGCTTTGGGCCACCCCGTATGAAGTGAGTATTGTACCATATAATGTTAATGCTGGTAGTACGTTTTCTTCAGGAAACATAGTTATAAAAAGTTTGACATCTTCTGAAATAGTTTTGATGTATACTGGTTCTTCTCCTTTAACTGGGGATATCTATCTATTAGTCAATATAAGTTGTGAAACAAGAGTTTCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3f1dd0309aac5b8a232d9cb494c12abf418858bda321a10d56f1631734719525
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8275
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and Genomic Analysis of Seven Phages Active Against Carbapenem-Resistant Klebsiella pneumoniae Cuello,L., Parmar,K., Supandy,A., Van Tyne,D. and Patel,R. — — GenBank