Protein

View in Explore
Genbank accession
YP_010669578.1 [GenBank]
Protein name
tail fiber-like protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MSKILANQIANYLDNAPIEVKEGVNIPAGKPLQVGGSSGTTGQVLTTDGSAISWQDAPYFSGAYADLTGKPTIPAAQVNSDWNAVGGVAQILNKPVVPPTPSVTIAPSPSGGGSLVYNGTNGEFTFTQPDLSPYLTTETDPVFLASDAAAVTAAKISNWDTSYSWGNHAAQGYITPTGINVSQLSASGGGSLVYDNVNGTLTYRPPDLSGYLTAEADTLATVTARGAVTTADVTVNDMVVNGNLTVIGTTTSNNQSTLNVAATEIVINDGQTGAPTLNGSLKIDRGDGTDTAIRWNEGTDTWEFTNNGTNYNPIPTNTNQLTNGAGFLTSYTETDPVFSGSPAGGITNTNITNWNTAYGWGNHATAGYLTAEADTLATITARGATTTQNVEVGALTVNGNLTVTGTTTTINTVNVRVSDNEITLNNDVTGTPTENAGIEVERGLSTNVRIRWDETSDRWTFTNNGTNYYNFPINISDLPNDSGYISSYTETDPIFSASAASGITTQNLTNWNSAYNWGNHATAGYLTDIAGESVSSLTDVNVTGASNNQLLRYNSSTSDWENWTPNYLTSYTETDPVFVASPSYGITNTNIGNWNTAFSWGNHAAAGYLTGITSESIGDLSDVNTSTTPTNGDALVWNGTNWAPAAVTSSGGGATVTTDDAAPTSPSDGDLWWKSDEGRLKVYYQDADSSQWVDASPPLAVTNPNIPVAVGCITLNGTSPTWSGTSGYSVSGSQPGGAGTDYVITLTFPSAYSARTDYIVQATYDSTNYVSGNGASIGVARGTASVVFTPRRWDENPLSLGEIMVTITNF
Physico‐chemical
properties
protein length:810 AA
molecular weight: 84675,61950 Da
isoelectric point:4,05003
aromaticity:0,08765
hydropathy:-0,28642

Domains

Domains [InterPro]
DC_1617
STR
13–371
DC_1617 DC_1499 DC_0994
DC_1617
STR
349–583
DC_1617
YP_010669578.1
1 810
Architecture
STR
RBD
STR 13-679 | RBD 695-810
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-H9-1
[NCBI] 		2783674 Uroviricota > Caudoviricetes > Pantevenvirales > Scyllavirus > Scyllavirus aitchnine
Host Synechococcus sp. MW02
[NCBI] 		1620844 Cyanobacteriota > Cyanophyceae > Synechococcales > Synechococcaceae > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010669578.1 [NCBI]
Genbank nucleotide accession
NC_070961.1 [NCBI]
CDS location
range 84667 -> 87099
strand -
CDS
ATGTCAAAAATTCTGGCAAATCAGATTGCAAATTACTTAGATAATGCACCGATTGAAGTAAAGGAAGGTGTGAACATTCCTGCGGGAAAACCTCTGCAAGTAGGCGGTTCTTCTGGTACTACTGGTCAGGTCTTAACTACTGATGGATCTGCTATATCGTGGCAAGATGCTCCTTATTTCAGTGGAGCATACGCAGATCTTACTGGCAAACCAACTATTCCAGCAGCTCAGGTAAATTCTGACTGGAATGCTGTTGGTGGTGTAGCACAAATTTTAAATAAACCAGTTGTTCCTCCAACACCATCAGTTACTATTGCTCCATCTCCATCTGGTGGTGGTTCTTTAGTTTACAATGGTACAAATGGAGAGTTTACTTTTACACAACCAGACCTATCACCATACTTAACAACAGAAACTGACCCAGTATTCCTTGCTTCTGACGCAGCTGCTGTAACTGCTGCTAAAATTTCTAATTGGGATACATCTTATAGTTGGGGTAACCATGCAGCGCAGGGATATATTACTCCAACAGGCATTAATGTCTCTCAGTTGTCTGCATCTGGTGGAGGATCACTAGTATATGATAATGTAAATGGAACTCTGACTTACAGACCACCCGATCTATCTGGATATCTTACAGCAGAAGCAGATACACTAGCAACAGTAACAGCAAGAGGTGCAGTGACAACTGCTGACGTTACTGTTAATGACATGGTTGTCAATGGAAACCTTACTGTTATTGGTACAACCACATCTAATAATCAGTCAACACTAAATGTTGCTGCCACTGAGATTGTTATTAATGATGGACAAACTGGAGCACCAACACTTAATGGATCTCTGAAAATTGATAGAGGAGATGGAACAGACACAGCGATCAGATGGAATGAAGGCACAGATACGTGGGAATTCACTAATAATGGAACCAATTACAATCCAATTCCAACAAACACCAATCAACTTACAAATGGTGCTGGGTTCTTAACTAGTTACACTGAAACTGACCCTGTATTTTCTGGTTCTCCTGCTGGTGGCATCACAAATACTAACATTACTAATTGGAACACTGCATACGGTTGGGGTAATCATGCTACAGCAGGATATCTTACAGCAGAAGCAGACACCCTAGCAACAATTACTGCACGGGGTGCTACTACAACTCAGAATGTTGAAGTTGGTGCGCTAACAGTTAATGGTAATCTTACTGTTACTGGCACAACTACGACAATTAACACAGTAAACGTTCGTGTATCTGATAATGAAATTACACTGAACAACGATGTTACGGGAACACCAACCGAGAATGCTGGTATTGAAGTCGAGCGTGGACTATCAACTAACGTTAGAATTAGATGGGATGAGACTTCTGATCGTTGGACTTTTACTAACAATGGAACTAACTATTATAATTTCCCAATAAACATCAGTGATCTTCCAAATGATAGTGGTTATATCAGTAGCTATACTGAAACTGACCCTATTTTTTCAGCATCAGCTGCTAGTGGAATCACCACTCAAAACTTAACAAACTGGAACAGCGCATATAACTGGGGAAACCATGCTACAGCAGGATATCTTACTGATATTGCTGGTGAGTCTGTCTCATCTTTGACAGATGTTAATGTCACTGGCGCTTCTAATAATCAGTTATTGAGGTATAATTCTTCCACTTCGGATTGGGAGAATTGGACACCTAATTATCTCACATCATACACCGAGACTGACCCTGTATTTGTAGCGTCTCCATCGTATGGTATTACTAATACAAACATTGGTAATTGGAACACTGCGTTCTCTTGGGGCAATCACGCTGCAGCAGGTTATCTAACAGGTATCACATCAGAGAGTATTGGTGATCTTTCTGATGTTAATACATCAACAACACCAACAAATGGAGATGCTTTAGTTTGGAATGGAACTAATTGGGCACCAGCAGCGGTTACTTCTTCTGGTGGTGGCGCTACCGTAACAACAGATGATGCTGCCCCAACAAGTCCTTCGGATGGAGACCTCTGGTGGAAATCGGATGAGGGTAGATTGAAAGTATATTATCAAGATGCTGATAGTTCGCAGTGGGTTGACGCATCACCACCATTAGCAGTTACTAATCCTAATATTCCTGTTGCTGTTGGATGTATCACATTAAATGGAACTTCTCCAACGTGGTCTGGAACATCTGGATACTCTGTATCTGGATCACAACCAGGAGGTGCTGGGACTGATTATGTAATCACCTTAACATTCCCCTCAGCATACTCAGCAAGAACAGATTATATCGTTCAAGCTACTTACGATAGCACCAATTATGTCTCTGGAAATGGAGCATCAATTGGTGTTGCTAGAGGAACTGCTAGTGTTGTATTCACTCCAAGAAGATGGGATGAAAACCCACTATCTCTTGGCGAAATCATGGTTACAATCACTAACTTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
50f055cc90efd1be15490d1c72e08c6c6f77689fc508d865223012cbd7b0e9fd
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5989
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Isolation and Genome Sequence of a Novel Cyanophage S-H9-1 from the Yellow Sea, China Jiang,T. 2019-04-04 — GenBank