Protein

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Genbank accession
YP_009831221.1 [GenBank]
Protein name
tail collar fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,91
Protein sequence
MNNTINHVSDKSVYVTFDPAGTQWPSTFKNVQQALAAIGPWARTDVGLPNAAPGVRGIAAIATQAMIDAGTDTQTIVTPALLAYRLQNPHASQTVWGYTRYATDAESVTVTNDLVSLTPRSLNYVFNTRQAKENVWGSVKLSTTAQATSGTDDTTAMTPLKVKQAISALVPVQANATESSFGLVQLATVAEVRAGTIRDGFAISPYTFIRLTASESDLGLLRIATQAEVNAGTDNTKAITPQKLAAVKGSGSTFGMVKLTTDINTGLANTALSAGANVVPSNKNSAITGGALYQGSISADNKYQTKTDVDANIPIGCMMLAAFNADVGNLFICNGRAMNRNSNPELFARIGYTYGGSGDIFNLPDMRGLVARGFDGGRGMDAGRGFGTYQADMFAYHEHDIQMIYQNGGNLPKSQAVYELKGAEKNDQRVMHLNNDYSKALGTGGNETRMKNLAVNYVIRVR
Physico‐chemical
properties
protein length:462 AA
molecular weight: 49151,69210 Da
isoelectric point:8,63897
aromaticity:0,07359
hydropathy:-0,19351

Domains

Domains [InterPro]
DC_0176
STR
1–440
DC_0176
IPR037053
ATT
302–367
IPR037053
SSF88874
STR
304–461
SSF88874
IPR011083
ATT
316–370
IPR011083
YP_009831221.1
1 462
Architecture
STR
ATT
STR
STR 1-301 | ATT 302-370 | STR 371-461 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Cronobacter phage vB_CsaM_leB
[NCBI] 		1885242 Uroviricota > Caudoviricetes > Pantevenvirales > Pseudotevenvirus > Pseudotevenvirus leb
Host Cronobacter sakazakii
[NCBI] 		28141 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009831221.1 [NCBI]
Genbank nucleotide accession
NC_048645 [NCBI]
CDS location
range 117501 -> 118889
strand +
CDS
ATGAACAATACAATTAACCACGTAAGCGATAAATCCGTTTACGTGACATTTGATCCTGCTGGTACGCAATGGCCTAGCACGTTTAAGAACGTACAACAGGCATTAGCCGCTATTGGGCCGTGGGCGCGTACTGATGTTGGTTTGCCTAATGCCGCGCCTGGTGTGCGCGGTATTGCTGCTATTGCGACACAGGCAATGATTGACGCGGGTACTGATACCCAGACGATCGTAACTCCTGCTTTGCTGGCATACCGTCTGCAAAACCCTCATGCATCACAAACCGTATGGGGTTACACTCGTTACGCAACTGATGCAGAATCAGTAACAGTAACAAACGATCTGGTTTCTCTTACTCCGCGCTCGTTGAACTATGTGTTTAACACCCGTCAGGCAAAAGAAAACGTTTGGGGTTCTGTGAAACTGTCAACAACTGCTCAGGCAACATCCGGTACTGATGACACTACCGCAATGACTCCGCTTAAAGTGAAGCAAGCGATCTCTGCTCTGGTTCCGGTACAGGCAAACGCAACAGAAAGTTCGTTTGGTCTTGTTCAGTTAGCAACTGTTGCAGAAGTTCGCGCGGGTACTATTCGCGATGGGTTTGCGATTTCGCCATACACGTTTATTCGTCTGACTGCAAGCGAAAGTGATTTAGGTTTACTCCGTATCGCTACCCAGGCAGAAGTAAACGCGGGTACTGATAACACCAAAGCAATCACCCCGCAAAAACTCGCTGCTGTGAAGGGTTCCGGCTCTACTTTCGGTATGGTTAAATTAACAACAGATATCAATACCGGATTAGCGAATACTGCTTTGTCTGCTGGTGCTAACGTAGTACCGAGCAACAAAAACAGTGCAATTACTGGTGGTGCATTGTATCAGGGTTCGATTAGTGCTGACAATAAATACCAGACAAAGACAGATGTTGACGCAAATATCCCGATCGGATGTATGATGCTTGCAGCGTTTAACGCCGATGTTGGTAACTTGTTTATCTGTAACGGGCGAGCGATGAACCGCAATTCAAACCCAGAACTGTTTGCCCGAATTGGTTATACATACGGCGGTTCTGGTGATATTTTCAACTTGCCTGATATGCGCGGTCTTGTAGCTCGCGGCTTTGATGGTGGGCGTGGTATGGATGCAGGTCGCGGTTTTGGTACATATCAGGCTGATATGTTTGCGTATCACGAACATGATATCCAGATGATTTACCAGAACGGCGGTAATCTTCCTAAGAGTCAAGCAGTTTATGAACTGAAAGGCGCAGAAAAGAATGACCAACGTGTTATGCACCTGAATAACGATTACAGCAAAGCATTAGGTACTGGCGGAAACGAAACGCGAATGAAAAACCTTGCGGTCAACTACGTAATTCGAGTACGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
6872e5cc2c9fc5fc2341e2149d4ec1f2e6657b2b2c715a04332dfe1730f69e6c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7217
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50